The microbiome of cryospheric ecosystems

被引:27
作者
Bourquin, Massimo [1 ]
Busi, Susheel Bhanu [2 ]
Fodelianakis, Stilianos [1 ]
Peter, Hannes [1 ]
Washburne, Alex [3 ]
Kohler, Tyler J. [1 ]
Ezzat, Leila [1 ]
Michoud, Gregoire [1 ]
Wilmes, Paul [2 ,4 ]
Battin, Tom J. [1 ]
机构
[1] Ecole Polytech Fed Lausanne, River Ecosyst Lab, Ctr Alpine & Polar Environm Res ALPOLE, EPFL, Lausanne, Switzerland
[2] Univ Luxembourg, Luxembourg Ctr Syst Biomed, Campus Belval,7 Ave Hauts Fourneaux, L-4362 Esch Sur Alzette, Luxembourg
[3] Selva Analyt LLC, Bozeman, MT 59718 USA
[4] Univ Luxembourg, Fac Sci Technol & Med, Dept Life Sci & Med, 7 Ave Hauts Fourneaux, L-4362 Esch Sur Alzette, Luxembourg
基金
瑞士国家科学基金会;
关键词
SEA-ICE; R PACKAGE; VISUALIZATION; BACTERIA; DATABASE; ECOLOGY;
D O I
10.1038/s41467-022-30816-4
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The cryosphere includes those parts of Earth where water or soil is frozen, such as snow, ice, glaciers and permafrost soils. Here, the authors present a global inventory of cryospheric microbial communities and their genetic repertoires. The melting of the cryosphere is among the most conspicuous consequences of climate change, with impacts on microbial life and related biogeochemistry. However, we are missing a systematic understanding of microbiome structure and function across cryospheric ecosystems. Here, we present a global inventory of the microbiome from snow, ice, permafrost soils, and both coastal and freshwater ecosystems under glacier influence. Combining phylogenetic and taxonomic approaches, we find that these cryospheric ecosystems, despite their particularities, share a microbiome with representatives across the bacterial tree of life and apparent signatures of early and constrained radiation. In addition, we use metagenomic analyses to define the genetic repertoire of cryospheric bacteria. Our work provides a reference resource for future studies on climate change microbiology.
引用
收藏
页数:9
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