Whole genome sequencing (WGS) for food-borne pathogen surveillance and control - taking the pulse

被引：30
作者：
Moran-Gilad, J. [1 ,2 ,3 ]
机构：
[1] Minist Hlth, Publ Hlth Serv, Jerusalem, Israel
[2] Ben Gurion Univ Negev, Fac Hlth Sci, Tel Aviv, Israel
[3] ESCMID Study Grp Genom & Mol Diagnost, Basel, Switzerland
来源：
EUROSURVEILLANCE | 2017年 / 22卷 / 23期
关键词：
CLINICAL MICROBIOLOGY;
D O I：
10.2807/1560-7917.ES.2017.22.23.30547
中图分类号：
R51 [传染病];
学科分类号：
100401 ;
摘要：
引用
收藏
页码：2 / 4
页数：3
相关论文
共 11 条
[1]  
[Anonymous], INFOSAN ACT REP 2014
[2]   Application of next generation sequencing in clinical microbiology and infection prevention [J].
Deurenberg, Ruud H. ;
Bathoorn, Erik ;
Chlebowicz, Monika A. ;
Couto, Natacha ;
Ferdous, Mithila ;
Garcia-Cobos, Silvia ;
Kooistra-Smid, Anna M. D. ;
Raangs, Erwin C. ;
Rosema, Sigrid ;
Veloo, Alida C. M. ;
Zhou, Kai ;
Friedrich, Alexander W. ;
Rossen, John W. A. .
JOURNAL OF BIOTECHNOLOGY, 2017, 243 :16-24
[3]   Transforming clinical microbiology with bacterial genome sequencing [J].
Didelot, Xavier ;
Bowden, Rory ;
Wilson, Daniel J. ;
Peto, Tim E. A. ;
Crook, Derrick W. .
NATURE REVIEWS GENETICS, 2012, 13 (09) :601-612
[4]   MLST revisited: the gene-by-gene approach to bacterial genomics [J].
Maiden, Martin C. J. ;
van Rensburg, Melissa J. Jansen ;
Bray, James E. ;
Earle, Sarah G. ;
Ford, Suzanne A. ;
Jolley, Keith A. ;
McCarthy, Noel D. .
NATURE REVIEWS MICROBIOLOGY, 2013, 11 (10) :728-736
[5]  
Moran-Gilad J, 2015, EUROSURVEILLANCE, V20
[6]   Proficiency testing for bacterial whole genome sequencing: an end-user survey of current capabilities, requirements and priorities [J].
Moran-Gilad, Jacob ;
Sintchenko, Vitali ;
Pedersen, Susanne Karlsmose ;
Wolfgang, William J. ;
Pettengill, James ;
Strain, Errol ;
Hendriksen, Rene S. .
BMC INFECTIOUS DISEASES, 2015, 15
[7]   PulseNet International: Vision for the implementation of whole genome sequencing (WGS) for global food-borne disease surveillance [J].
Nadon, Celine ;
Van Walle, Ivo ;
Gerner-Smidt, Peter ;
Campos, Josefina ;
Chinen, Isabel ;
Concepcion-Acevedo, Jeniffer ;
Gilpin, Brent ;
Smith, Anthony M. ;
Kam, Kai Man ;
Perez, Enrique ;
Trees, Eija ;
Kubota, Kristy ;
Takkinen, Johanna ;
Nielsen, Eva Moller ;
Carleton, Heather .
EUROSURVEILLANCE, 2017, 22 (23) :13-24
[8]   The Technical and Biological Reproducibility of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry (MALDI-TOF MS) Based Typing: Employment of Bioinformatics in a Multicenter Study [J].
Oberle, Michael ;
Wohlwend, Nadia ;
Jonas, Daniel ;
Maurer, Florian P. ;
Jost, Geraldine ;
Tschudin-Sutter, Sarah ;
Vranckx, Katleen ;
Egli, Adrian .
PLOS ONE, 2016, 11 (10)
[9]   Navigating Microbiological Food Safety in the Era of Whole-Genome Sequencing [J].
Ronholm, J. ;
Nasheri, Neda ;
Petronella, Nicholas ;
Pagotto, Franco .
CLINICAL MICROBIOLOGY REVIEWS, 2016, 29 (04) :837-857
[10]   Validation of Metagenomic Next-Generation Sequencing Tests for Universal Pathogen Detection [J].
Schlaberg, Robert ;
Chiu, Charles Y. ;
Miller, Steve ;
Procop, Gary W. ;
Weinstock, George .
ARCHIVES OF PATHOLOGY & LABORATORY MEDICINE, 2017, 141 (06) :776-786
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