Fast discrimination of tumor and blood cells by label-free surface-enhanced Raman scattering spectra and deep learning

被引:21
作者
Fang, XiangLin [1 ]
Zeng, QiuYao [2 ]
Yan, XinLiang [1 ]
Zhao, Zuyi [3 ]
Chen, Na [1 ]
Deng, QianRu [1 ]
Zhu, MengHan [1 ]
Zhang, YanJiao [4 ]
Li, ShaoXin [1 ]
机构
[1] Guangdong Med Univ, Sch Biomed Engn, Biomed Photon Lab, Dongguan 523808, Peoples R China
[2] Sun Yat Sen Univ, Collaborat Innovat Ctr Canc Med, State Key Lab Oncol South China, Dept Clin Lab Med,Canc Ctr, Guangzhou 510060, Peoples R China
[3] Sun Yat Sen Univ, Sch Math, Guangzhou 510275, Peoples R China
[4] Guangdong Med Univ, Sch Basic Med, Dongguan 523808, Peoples R China
基金
中国国家自然科学基金;
关键词
RAPID IDENTIFICATION; CURRENT CHALLENGES; NEURAL-NETWORKS; SPECTROSCOPY; LUNG; CLASSIFICATION; NANOPARTICLES; ALGORITHM; SUBSTRATE; CANCER;
D O I
10.1063/5.0042662
中图分类号
O59 [应用物理学];
学科分类号
摘要
Rapidly and accurately identifying tumor cells and blood cells is an important part of circulating tumor cell detection. Raman spectroscopy is a molecular vibrational spectroscopy technique that can provide fingerprint information about molecular vibrational and rotational energy levels. Deep learning is an advanced machine learning method that can be used to classify various data accurately. In this paper, the surface-enhanced Raman scattering spectra of blood cells and various tumor cells are measured with the silver film substrate. It is found that there are significant differences in nucleic acid-related characteristic peaks between most tumor cells and blood cells. These spectra are classified by the feature peak ratio method, principal component analysis combined with K-nearest neighbor, and residual network, which is a kind of deep learning algorithm. The results show that the ratio method and principal component analysis combined with the K-nearest neighbor method could only distinguish some tumor cells from blood cells. The residual network can quickly identify various tumor cells and blood cells with an accuracy of 100%, and there is no complex preprocessing for the surface-enhanced Raman scattering spectra. This study shows that the silver film surface-enhanced Raman scattering technology combined with deep learning algorithms can quickly and accurately identify blood cells and tumor cells, indicating an important reference value for the label-free detecting circulating tumor cells.
引用
收藏
页数:11
相关论文
共 42 条
[1]   A deep convolutional neural network model to classify heartbeats [J].
Acharya, U. Rajendra ;
Oh, Shu Lih ;
Hagiwara, Yuki ;
Tan, Jen Hong ;
Adam, Muhammad ;
Gertych, Arkadiusz ;
Tan, Ru San .
COMPUTERS IN BIOLOGY AND MEDICINE, 2017, 89 :389-396
[2]   Clinical-grade computational pathology using weakly supervised deep learning on whole slide images [J].
Campanella, Gabriele ;
Hanna, Matthew G. ;
Geneslaw, Luke ;
Miraflor, Allen ;
Silva, Vitor Werneck Krauss ;
Busam, Klaus J. ;
Brogi, Edi ;
Reuter, Victor E. ;
Klimstra, David S. ;
Fuchs, Thomas J. .
NATURE MEDICINE, 2019, 25 (08) :1301-+
[3]   Folate Receptor-Positive Circulating Tumor Cell Detected by LT-PCR-Based Method as a Diagnostic Biomarker for Non-Small-Cell Lung Cancer [J].
Chen, Xiaoxia ;
Zhou, Fei ;
Li, Xuefei ;
Yang, Guohua ;
Zhang, Ling ;
Ren, Shengxiang ;
Zhao, Chao ;
Deng, Qinfang ;
Li, Wei ;
Gao, Guanghui ;
Li, Aiwu ;
Zhou, Caicun .
JOURNAL OF THORACIC ONCOLOGY, 2015, 10 (08) :1163-1171
[4]   Fast and accurate decoding of Raman spectra-encoded suspension arrays using deep learning [J].
Chen, Xuejing ;
Xie, Luyuan ;
He, Yonghong ;
Guan, Tian ;
Zhou, Xuesi ;
Wang, Bei ;
Feng, Guangxia ;
Yu, Haihong ;
Ji, Yanhong .
ANALYST, 2019, 144 (14) :4312-4319
[5]  
Dang Nobel, 2020, International Conference on Innovative Computing and Communications. Proceedings of ICICC 2019. Advances in Intelligent Systems and Computing (AISC 1087), P789, DOI 10.1007/978-981-15-1286-5_70
[6]   Deep learning-based component identification for the Raman spectra of mixtures [J].
Fan, Xiaqiong ;
Ming, Wen ;
Zeng, Huitao ;
Zhang, Zhimin ;
Lu, Hongmei .
ANALYST, 2019, 144 (05) :1789-1798
[7]   Deep learning in medical image analysis: A third eye for doctors [J].
Fourcade, A. ;
Khonsari, R. H. .
JOURNAL OF STOMATOLOGY ORAL AND MAXILLOFACIAL SURGERY, 2019, 120 (04) :279-288
[8]  
Gao Y., 1994, CHIN J OBSTET GYNECO, V29, P162
[9]   Direct surface-enhanced Raman scattering (SERS) spectroscopy of nucleic acids: from fundamental studies to real-life applications [J].
Garcia-Rico, Eduardo ;
Alvarez-Puebla, Ramon A. ;
Guerrini, Luca .
CHEMICAL SOCIETY REVIEWS, 2018, 47 (13) :4909-4923
[10]   Optimized Binary Bat algorithm for classification of white blood cells [J].
Gupta, Deepak ;
Arora, Jatin ;
Agrawal, Utkarsh ;
Khanna, Ashish ;
de Albuquerque, Victor Hugo C. .
MEASUREMENT, 2019, 143 :180-190