Neochroococcus gongqingensis gen. et sp. nov., a new member of coccoid cyanobacteria from a watercourse, Eastern China

被引:6
作者
Geng, Ruozhen [1 ,2 ]
Wang, Yilang [1 ,2 ]
Cai, Fangfang [1 ,2 ]
Zhang, Yige [1 ,3 ]
Yang, Ping [4 ]
Dai, Guofei [4 ]
Li, Renhui [1 ,5 ]
Yu, Gongliang [1 ]
机构
[1] Chinese Acad Sci, Inst Hydrobiol, Key Lab Algal Biol, Wuhan 430072, Peoples R China
[2] Univ Chinese Acad Sci, Beijing 100039, Peoples R China
[3] Jiangxi Normal Univ, Coll Life Sci, Nanchang 330022, Jiangxi, Peoples R China
[4] Jiangxi Prov Inst Water Sci, Nanchang 330029, Jiangxi, Peoples R China
[5] Wenzhou Univ, Coll Life & Environm Sci, Wenzhou 325039, Zhejiang, Peoples R China
关键词
Coccoid cyanobacteria; Neochroococcus gongqingensis; Eucapsis; Polyphasic; Taxonomy; TAXONOMIC CLASSIFICATION; PERFORMANCE;
D O I
10.5507/fot.2020.015
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
The taxonomy of coccoid cyanobacteria has been largely revised in recent years. In this study, a novel coccoid cyanobacterial strain was isolated from a watercourse at the Poyang Lake Model Research Base, Jiangxi province, Eastern China. A polyphasic approach combining morphological and molecular testing was used to characterize this strain referred to as CHAB 4018. Regarding colonial fonn and cellular spatial arrangement, this strain was morphologically similar to strains of the genus Eucapsis. The maximum 16S rRNA gene sequence similarity of this strain to the currently described cyanobacteria genera was 93.40%, exceeding the cutoff for genus delimitation in bacteriology. Furthermore, a phylogenetic tree based on 16S rRNA gene sequences indicated that strain CHAB 4018 formed a unique Glade in the family Chroococcaceae and was phylogenetically close to the recently established genus Cryptococcum but distant from the Chroococcus 'sensu stricto' Glade and from Eucapsis. Thus, a novel coccoid cyanobacterial genus with a new species is here described as Neochroococcus gongqingensis. A large phylogenetic tree using more strains suggested phylogenetic intermixture of Chroococcus-like and Eucapsis-like cyanobacteria, suggesting the need for further studies on the phylogeny and taxonomy of coccoid cyanobacteria.
引用
收藏
页码:44 / 52
页数:9
相关论文
共 28 条
[1]  
Ayres DL, 2012, SYST BIOL, V61, P170, DOI [10.1093/sysbio/syr100, 10.1093/sysbio/sys029]
[2]  
Chan P.P., 2016, tRNAscan-SE On-line: integrating search and context for analysis of transfer, DOI 10.5507/ fot.2020.015
[3]  
CLEMENTS F. E., 1909, MINNESOTA BOTANICAL, V4, P133
[4]   Changes in cell turgor pressure related to uptake of solutes by Microcystis sp strain 8401 [J].
Comte, Katia ;
Holland, Daryl P. ;
Walsby, Anthony E. .
FEMS MICROBIOLOGY ECOLOGY, 2007, 61 (03) :399-405
[5]   Species concepts and speciation factors in cyanobacteria, with connection to the problems of diversity and classification [J].
Dvorak, Petr ;
Poulickova, Aloisie ;
Hasler, Petr ;
Belli, Mattia ;
Casamatta, Dale A. ;
Papini, Alessio .
BIODIVERSITY AND CONSERVATION, 2015, 24 (04) :739-757
[6]   ISOLATION AND DIRECT COMPLETE NUCLEOTIDE DETERMINATION OF ENTIRE GENES - CHARACTERIZATION OF A GENE CODING FOR 16S-RIBOSOMAL RNA [J].
EDWARDS, U ;
ROGALL, T ;
BLOCKER, H ;
EMDE, M ;
BOTTGER, EC .
NUCLEIC ACIDS RESEARCH, 1989, 17 (19) :7843-7853
[7]  
ELENKIN A. A., 1933, T BOT I AKAD NAUK, V2, P17
[8]  
Gama W.A., 2019, EUR J PHYCOL, V61, P1
[9]   Limnothrix redekei (Van Goor) Meffert (Cyanobacteria) strains from Lake Kastoria, Greece form a separate phylogenetic group [J].
Gkelis, S ;
Rajaniemi, P ;
Vardaka, E ;
Moustaka-Gouni, M ;
Lanaras, T ;
Sivonen, K .
MICROBIAL ECOLOGY, 2005, 49 (01) :176-182
[10]   New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0 [J].
Guindon, Stephane ;
Dufayard, Jean-Francois ;
Lefort, Vincent ;
Anisimova, Maria ;
Hordijk, Wim ;
Gascuel, Olivier .
SYSTEMATIC BIOLOGY, 2010, 59 (03) :307-321