Understanding the omicron variant (B.1.1.529) of SARS-CoV-2: Mutational impacts, concerns, and the possible solutions

被引:35
作者
Islam, Fahadul [1 ]
Dhawan, Manish [2 ,3 ]
Nafady, Mohamed H. [4 ]
Emran, Talha Bin [5 ,8 ]
Mitra, Saikat [6 ]
Choudhary, Om Prakash [7 ]
Akter, Aklima [1 ]
机构
[1] Daffodil Int Univ, Fac Allied Hlth Sci, Dept Pharm, Dhaka 1207, Bangladesh
[2] Punjab Agr Univ, Dept Microbiol, Ludhiana 141004, Punjab, India
[3] Trafford Coll, Manchester WA14 5PQ, England
[4] Misr Univ Sci & Technol, Fac Appl Hlth Sci Technol, Giza 12568, Egypt
[5] BGC Trust Univ Bangladesh, Dept Pharm, Chittagong 4381, Bangladesh
[6] Univ Dhaka, Fac Pharm, Dept Pharm, Dhaka 1000, Bangladesh
[7] Cent Agr Univ I, Coll Vet Sci & Anim Husb, Dept Vet Anat & Histol, Aizawl, India
[8] BGC Trust Univ Bangladesh, Dept Pharm, Chittagong 4381, Bangladesh
关键词
Variant of concern (VOC); Omicron variant (B.1.1.529); SARS-CoV-2; COVID-19; MAIN PROTEASE; INFECTIVITY;
D O I
10.1016/j.amsu.2022.103737
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Despite many nations' best efforts to contain the so-called COVID-19 pandemic, the emergence of the SARS-CoV2 Omicron strain (B.1.1.529) has been identified as a serious concern. After more than two years of COVID-19 pandemic and more than a year of worldwide vaccination efforts, the globe will not be free of COVID-19 variants such as Delta and Omicron variants. According to current statistics, the Omicron variant has more than 30 mutations when contrasted to other VOCs such as Alpha (B.1.1.7), Beta (B.1.351), and Delta (B.1.617.2). High numbers of changes, particularly in the spike protein (S-Protein), raise worries about the virus's capacity to resist pre-existing immunity acquired by vaccination or spontaneous infection and antibody-based therapy. The Omicron variant raised international concerns, resuming travel bans and coming up with many questions about its severity, transmissibility, testing, detection, and vaccines efficiency against it. Additionally, inadequate health care infrastructures and many immunocompromised individuals increase the infection susceptibility. The current status of low vaccination rates will play a significant role in omicron spreading and create a fertile ground for producing new variants. As a result, this article emphasizes the mutational changes and their consequences. In addition, the potential preventing measures have been examined in detail.
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页数:7
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共 72 条
[11]   HEAVILY MUTATED OMICRON VARIANT PUTS SCIENTISTS ON ALERT [J].
Callaway, Ewen .
NATURE, 2021, 600 (7887) :21-21
[12]   Emerging mutations in the SARS-CoV-2 variants and their role in antibody escape to small molecule-based therapeutic resistance [J].
Chakraborty, Chiranjib ;
Bhattacharya, Manojit ;
Sharma, Ashish Ranjan .
CURRENT OPINION IN PHARMACOLOGY, 2022, 62 :64-73
[13]   D614G mutation eventuates in all VOI and VOC in SARS-CoV-2: Is it part of the positive selection pioneered by Darwin? [J].
Chakraborty, Chiranjib ;
Saha, Abinit ;
Sharma, Ashish Ranjan ;
Bhattacharya, Manojit ;
Lee, Sang-Soo ;
Agoramoorthy, Govindasamy .
MOLECULAR THERAPY-NUCLEIC ACIDS, 2021, 26 :237-241
[14]   Omicron variant (B.1.1.529) of SARS-CoV-2: Threat assessment and plan of action [J].
Choudhary, Om Prakash ;
Dhawan, Manish ;
Priyanka .
INTERNATIONAL JOURNAL OF SURGERY, 2022, 97
[15]   Covid-19: Early studies give hope omicron is milder than other variants [J].
Christie, Bryan .
BMJ-BRITISH MEDICAL JOURNAL, 2021, 375 :n3144
[16]  
CoVariants, SHAR MUT
[17]   Detection of highly muted coronavirus variant Omicron (B.1.1.529) is triggering the alarm for South Asian countries: Associated risk factors and preventive actions [J].
Daria, Sohel ;
Bhuiyan, Mohiuddin A. ;
Islam, Md. Rabiul .
JOURNAL OF MEDICAL VIROLOGY, 2022, 94 (04) :1267-1268
[18]   Reduced neutralisation of SARS-CoV-2 omicron B.1.1.529 variant by post-immunisation serum [J].
Dejnirattisai, Wanwisa ;
Shaw, Robert H. ;
Supasa, Piyada ;
Liu, Chang ;
Stuart, Arabella S. V. ;
Pollard, Andrew J. ;
Liu, Xinxue ;
Lambe, Teresa ;
Crook, Derrick ;
Stuart, Dave I. ;
Mongkolsapaya, Juthathip ;
Nguyen-Van-Tam, Jonathan S. ;
Snape, Matthew D. ;
Screaton, Gavin R. .
LANCET, 2022, 399 (10321) :234-236
[19]   Analysis of SARS-CoV-2 nucleocapsid phosphoprotein N variations in the binding site to human 14-3-3 proteins [J].
Del Veliz, Samanta ;
Rivera, Lautaro ;
Bustos, Diego M. ;
Uhart, Marina .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2021, 569 :154-160
[20]   SARS-CoV-2 existence in sewage and wastewater: A global public health concern? [J].
Dhama, Kuldeep ;
Patel, Shailesh Kumar ;
Yatoo, Mohd Iqbal ;
Tiwari, Ruchi ;
Sharun, Khan ;
Dhama, Jaideep ;
Natesan, Senthilkumar ;
Malik, Yashpal Singh ;
Singh, Karam Pal ;
Harapan, Harapan .
JOURNAL OF ENVIRONMENTAL MANAGEMENT, 2021, 280