Genome-Wide Identification, Characterization, and Expression Analysis of TUBBY Gene Family in Wheat (Triticum aestivum L.) under Biotic and Abiotic Stresses

被引:6
|
作者
Altaf, Adil [1 ]
Zada, Ahmad [2 ]
Hussain, Shahid [3 ]
Gull, Sadia [4 ]
Ding, Yonggang [1 ]
Tao, Rongrong [1 ]
Zhu, Min [1 ,5 ]
Zhu, Xinkai [1 ,5 ,6 ]
机构
[1] Yangzhou Univ, Jiangsu Key Lab Crop Genet & Physiol, Jiangsu Key Lab Crop Cultivat & Physiol, Wheat Res Ctr,Coll Agr, Yangzhou 225009, Jiangsu, Peoples R China
[2] Yangzhou Univ, Coll Biosci & Biotechnol, Yangzhou 225009, Jiangsu, Peoples R China
[3] Yangzhou Univ, Coll Agr, Yangzhou 225009, Jiangsu, Peoples R China
[4] Yangzhou Univ, Coll Hort & Plant Protect, Yangzhou 225009, Jiangsu, Peoples R China
[5] Yangzhou Univ, Coinnovat Ctr Modern Prod Technol Grain Crops, Yangzhou 225009, Jiangsu, Peoples R China
[6] Yangzhou Univ, Minist Educ China, Joint Int Res Lab Agr & Agriprod Safety, Yangzhou 225009, Jiangsu, Peoples R China
来源
AGRONOMY-BASEL | 2022年 / 12卷 / 05期
基金
中国国家自然科学基金;
关键词
wheat; temperature stress; hormonal stress; genes; TaTLPs; TRANSCRIPTION FACTOR; ARABIDOPSIS; PROTEINS; RICE;
D O I
10.3390/agronomy12051121
中图分类号
S3 [农学(农艺学)];
学科分类号
0901 ;
摘要
The TUBBY gene family is a group of transcription factors found in animals and plants with many functions. TLP genes have a significant role in response to different abiotic stresses. However, there is limited knowledge regarding the TUBBY gene family in T. aestivum. Here we identified 40 TaTLP genes in wheat to reveal their potential function. This study found that TUBBY (TaTLP) genes are highly conserved in wheat. The GO analysis of TaTLP genes revealed their role in growth and stress responses. Promoter analysis revealed that most TaTLPs participate in hormone and abiotic stress responses. The heatmap analysis also showed that TaTLP genes showed expression under various hormonal and abiotic stress conditions. Several genes were upregulated under different hormonal and temperature stresses. The qRT-PCR analysis confirmed our hypotheses. The results clearly indicate that various TaTLP genes showed high expression under temperature stress conditions. Furthermore, the results showed that TaTLP genes are expressed in multiple tissues with different expression patterns. For the first time in wheat, we present a comprehensive TaTLP analysis. These findings provide valuable clues for future research about the role of TLPs in the abiotic stress process in plants. Overall, the research outcomes can serve as a model for improving wheat quality through genetic engineering.
引用
收藏
页数:16
相关论文
共 50 条
  • [21] Genome-wide characterization of WRKY gene family in Helianthus annuus L. and their expression profiles under biotic and abiotic stresses
    Li, Juanjuan
    Islam, Faisal
    Huang, Qian
    Wang, Jian
    Zhou, Weijun
    Xu, Ling
    Yang, Chong
    PLOS ONE, 2020, 15 (12):
  • [22] Genome-wide identification and characterization of the TPS gene family in wheat (Triticum aestivum L.) and expression analysis in response to aphid damage
    Lei Zhao
    Xiaojing Zhao
    Frédéric Francis
    Yong Liu
    Acta Physiologiae Plantarum, 2021, 43
  • [23] Genome-wide identification, characterization, and expression patterns analysis of the SBP-box gene family in wheat (Triticum aestivum L.)
    Ying Li
    Qilu Song
    Yamin Zhang
    Zheng Li
    Jialin Guo
    Xinhong Chen
    Gaisheng Zhang
    Scientific Reports, 10
  • [24] Genome-wide identification and expression analysis of ADP-ribosylation factors associated with biotic and abiotic stress in wheat (Triticum aestivum L.)
    Li, Yaqian
    Song, Jinghan
    Zhu, Guang
    Hou, Zehao
    Wang, Lin
    Wu, Xiaoxue
    Fang, Zhengwu
    Liu, Yike
    Gao, Chunbao
    PEERJ, 2021, 9
  • [25] Genome-wide identification and expression profiling of glutathione transferase gene family under multiple stresses and hormone treatments in wheat (Triticum aestivum L.)
    Ruibin Wang
    Jingfei Ma
    Qian Zhang
    Chunlai Wu
    Hongyan Zhao
    Yanan Wu
    Guangxiao Yang
    Guangyuan He
    BMC Genomics, 20
  • [26] Genome-wide identification and expression profiling of glutathione transferase gene family under multiple stresses and hormone treatments in wheat (Triticum aestivum L.)
    Wang, Ruibin
    Ma, Jingfei
    Zhang, Qian
    Wu, Chunlai
    Zhao, Hongyan
    Wu, Yanan
    Yang, Guangxiao
    He, Guangyuan
    BMC GENOMICS, 2019, 20 (01)
  • [27] Genome-wide survey of the amino acid transporter gene family in wheat (Triticum aestivum L.): Identification, expression analysis and response to abiotic stress
    Tian, Ruizheng
    Yang, Yang
    Chen, Maohua
    INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2020, 162 : 1372 - 1387
  • [28] Genome-wide analysis of the VQ motif-containing gene family and expression profiles during phytohormones and abiotic stresses in wheat (Triticum aestivum L.)
    Lili Zhang
    Keke Wang
    Yuxuan Han
    Luyu Yan
    Yan Zheng
    Zhenzhen Bi
    Xin Zhang
    Xiaohong Zhang
    Donghong Min
    BMC Genomics, 23
  • [29] Genome-wide analysis of the VQ motif-containing gene family and expression profiles during phytohormones and abiotic stresses in wheat (Triticum aestivum L.)
    Zhang, Lili
    Wang, Keke
    Han, Yuxuan
    Yan, Luyu
    Zheng, Yan
    Bi, Zhenzhen
    Zhang, Xin
    Zhang, Xiaohong
    Min, Donghong
    BMC GENOMICS, 2022, 23 (01)
  • [30] Genome-wide identification and expression analysis of the NHX gene family under salt stress in wheat (Triticum aestivum L)
    Sharma, Pradeep
    Mishra, Shefali
    Pandey, Bharati
    Singh, Gyanendra
    FRONTIERS IN PLANT SCIENCE, 2023, 14