Single cell RNA sequencing for breast cancer: present and future

被引:26
作者
Ren, Lili [1 ]
Li, Junyi [1 ]
Wang, Chuhan [1 ]
Lou, Zheqi [1 ]
Gao, Shuangshu [1 ]
Zhao, Lingyu [1 ]
Wang, Shuoshuo [1 ]
Chaulagain, Anita [2 ]
Zhang, Minghui [3 ]
Li, Xiaobo [1 ]
Tang, Jing [1 ]
机构
[1] Harbin Med Univ, Dept Pathol, Harbin 150081, Peoples R China
[2] Harbin Med Univ, Dept Microbiol, Harbin 150081, Peoples R China
[3] Chifeng City Hosp, Dept Oncol, Chifeng 024000, Peoples R China
关键词
GENE-EXPRESSION PATTERNS; MAMMARY STEM-CELLS; HETEROGENEITY; EVOLUTION; REVEALS; SEQ; PHENOTYPE; RISK;
D O I
10.1038/s41420-021-00485-1
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Breast cancer is one of the most common malignant tumors in women. It is a heterogeneous disease related to genetic and environmental factors. Presently, the treatment of breast cancer still faces challenges due to recurrence and metastasis. The emergence of single-cell RNA sequencing (scRNA-seq) technology has brought new strategies to deeply understand the biological behaviors of breast cancer. By analyzing cell phenotypes and transcriptome differences at the single-cell level, scRNA-seq reveals the heterogeneity, dynamic growth and differentiation process of cells. This review summarizes the application of scRNA-seq technology in breast cancer research, such as in studies on cell heterogeneity, cancer cell metastasis, drug resistance, and prognosis. scRNA-seq technology is of great significance to deeply analyze the mechanism of breast cancer occurrence and development, identify new therapeutic targets and develop new therapeutic approaches for breast cancer.
引用
收藏
页数:11
相关论文
共 63 条
  • [1] Single-cell RNA sequencing reveals developmental heterogeneity among early lymphoid progenitors
    Alberti-Servera, Llucia
    von Muenchow, Lilly
    Tsapogas, Panagiotis
    Capoferri, Giuseppina
    Eschbach, Katja
    Beisel, Christian
    Ceredig, Rhodri
    Ivanek, Robert
    Rolink, Antonius
    [J]. EMBO JOURNAL, 2017, 36 (24) : 3619 - 3633
  • [2] Defining the emergence of myeloid-derived suppressor cells in breast cancer using single-cell transcriptomics
    Alshetaiwi, Hamad
    Pervolarakis, Nicholas
    McIntyre, Laura Lynn
    Ma, Dennis
    Quy Nguyen
    Rath, Jan Akara
    Nee, Kevin
    Hernandez, Grace
    Evans, Katrina
    Torosian, Leona
    Silva, Anushka
    Walsh, Craig
    Kessenbrock, Kai
    [J]. SCIENCE IMMUNOLOGY, 2020, 5 (44)
  • [3] Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment
    Azizi, Elham
    Carr, Ambrose J.
    Plitas, George
    Cornish, Andrew E.
    Konopacki, Catherine
    Prabhakaran, Sandhya
    Nainys, Juozas
    Wu, Kenmin
    Kiseliovas, Vaidotas
    Setty, Manu
    Choi, Kristy
    Fromme, Rachel M.
    Phuong Dao
    McKenney, Peter T.
    Wasti, Ruby C.
    Kadaveru, Krishna
    Mazutis, Linas
    Rudensky, Alexander Y.
    Pe'er, Dana
    [J]. CELL, 2018, 174 (05) : 1293 - +
  • [4] Differentiation dynamics of mammary epithelial cells revealed by single-cell RNA sequencing
    Bach, Karsten
    Pensa, Sara
    Grzelak, Marta
    Hadfield, James
    Adams, David J.
    Marioni, John C.
    Khaled, Walid T.
    [J]. NATURE COMMUNICATIONS, 2017, 8
  • [5] Spatially and functionally distinct subclasses of breast cancer-associated fibroblasts revealed by single cell RNA sequencing
    Bartoschek, Michael
    Oskolkov, Nikolay
    Bocci, Matteo
    Lovrot, John
    Larsson, Christer
    Sommarin, Mikael
    Madsen, Chris D.
    Lindgren, David
    Pekar, Gyula
    Karlsson, Goran
    Ringner, Markus
    Bergh, Jonas
    Bjorklund, Asa
    Pietras, Kristian
    [J]. NATURE COMMUNICATIONS, 2018, 9
  • [6] Combating subclonal evolution of resistant cancer phenotypes
    Brady, Samuel W.
    McQuerry, Jasmine A.
    Qiao, Yi
    Piccolo, Stephen R.
    Shrestha, Gajendra
    Jenkins, David F.
    Layer, Ryan M.
    Pedersen, Brent S.
    Miller, Ryan H.
    Esch, Amanda
    Selitsky, Sara R.
    Parker, Joel S.
    Anderson, Layla A.
    Dalley, Brian K.
    Factor, Rachel E.
    Reddy, Chakravarthy B.
    Boltax, Jonathan P.
    Li, Dean Y.
    Moos, Philip J.
    Gray, Joe W.
    Heiser, Laura M.
    Buys, Saundra S.
    Cohen, Adam L.
    Johnson, W. Evan
    Quinlan, Aaron R.
    Marth, Gabor
    Werner, Theresa L.
    Bild, Andrea H.
    [J]. NATURE COMMUNICATIONS, 2017, 8
  • [7] Time to abandon single-site irradiation for inducing abscopal effects
    Brooks, Eric D.
    Chang, Joe Y.
    [J]. NATURE REVIEWS CLINICAL ONCOLOGY, 2019, 16 (02) : 123 - 135
  • [8] A chemical probe of CARM1 alters epigenetic plasticity against breast cancer cell invasion
    Cai, Xiao-Chuan
    Zhang, Tuo
    Kim, Eui-jun
    Jiang, Ming
    Wang, Ke
    Wang, Junyi
    Chen, Shi
    Zhang, Nawei
    Wu, Hong
    Li, Fengling
    dela Sena, Carlo C.
    Zeng, Hong
    Vivcharuk, Victor
    Niu, Xiang
    Zheng, Weihong
    Lee, Jonghan P.
    Chen, Yuling
    Barsyte, Dalia
    Szewczyk, Magda
    Hajian, Taraneh
    Ibanez, Glorymar
    Dong, Aiping
    Dombrovski, Ludmila
    Zhang, Zhenyu
    Deng, Haiteng
    Min, Jinrong
    Arrowsmith, Cheryl H.
    Mazutis, Linas
    Shi, Lei
    Vedadi, Masoud
    Brown, Peter J.
    Xiang, Jenny
    Qin, Li-Xuan
    Xu, Wei
    Luo, Minkui
    [J]. ELIFE, 2019, 8
  • [9] Single-cell landscape in mammary epithelium reveals bipotent-like cells associated with breast cancer risk and outcome
    Chen, Weiyan
    Morabito, Samuel J.
    Kessenbrock, Kai
    Enver, Tariq
    Meyer, Kerstin B.
    Teschendorff, Andrew E.
    [J]. COMMUNICATIONS BIOLOGY, 2019, 2 (1)
  • [10] Turning foes to friends: targeting cancer-associated fibroblasts
    Chen, Xueman
    Song, Erwei
    [J]. NATURE REVIEWS DRUG DISCOVERY, 2019, 18 (02) : 99 - 115