Validation of a Real-Time Reverse Transcriptase-PCR Assay for the Detection of H7 Avian Influenza Virus

被引:6
作者
Pedersen, Janice [1 ]
Killian, Mary Lea [1 ]
Hines, Nichole [1 ]
Senne, Dennis [1 ]
Panigrahy, Brundaban [1 ]
Ip, Hon S. [2 ]
Spackman, Erica [3 ]
机构
[1] US Anim & Plant Hlth Inspect Serv, USDA, Vet Serv, Natl Vet Serv Labs, Ames, IA 50010 USA
[2] US Geol Survey, US Dept Interior, Ctr Hlth, Madison, WI 53711 USA
[3] ARS, USDA, Res Lab, Athens, GA 30605 USA
关键词
avian influenza; poultry; real-time RT-PCR; surveillance; wild birds; CANADA;
D O I
10.1637/8911-043009-Reg.1
中图分类号
S85 [动物医学(兽医学)];
学科分类号
0906 ;
摘要
This report describes the validation of an avian influenza virus (AIV) H7 subtype-specific real-time reverse transcriptase PCR (rRT-PCR) assay developed at the Southeast Poultry Research Laboratory (SEPRL) for the detection of H7 AI in North and South American wild aquatic birds and poultry. The validation was a collaborative effort by the SEPRL and the National Veterinary Services Laboratories. The 2008 H7 rRT-PCR assay detects 10(1) 50% embryo infectious doses per reaction, or 10(3)-10(4) copies of transcribed H7 RNA. Diagnostic sensitivity and specificity were estimated to be 97.5% and 82.4%, respectively; the assay was shown to be specific for H7 AI when tested with >270 wild birds and poultry viruses. Following validation, the 2008 rRT-PCR. procedure was adopted as an official U.S. Department of Agriculture procedure for the detection of H7 AIV. The 2008 H7 assay replaced the previously used (2002) assay, which does not detect H7 viruses currently circulating in wild birds in North and South America.
引用
收藏
页码:639 / 643
页数:5
相关论文
共 9 条
[1]   The 2005/2006 avian influenza monitoring of wild birds and commercial poultry in Switzerland [J].
Dalessi, Silvia ;
Hoop, Richard ;
Engels, Monika .
AVIAN DISEASES, 2007, 51 (01) :355-358
[2]   Characteristics of diagnostic tests used in the 2002 low-pathogenicity avian influenza H7N2 outbreak in Virginia [J].
Elvinger, Francois ;
Akey, Bruce L. ;
Senne, Dennis A. ;
Pierson, F. William ;
Porter-Spalding, Barbara A. ;
Spackman, Erica ;
Suarez, David L. .
JOURNAL OF VETERINARY DIAGNOSTIC INVESTIGATION, 2007, 19 (04) :341-348
[3]  
GIOVANNI C, 2007, AVIAN DIS, V51, P414
[4]   Surveillance on avian influenza in Bulgaria [J].
Goujgoulova, G. ;
Oreshkova, N. .
AVIAN DISEASES, 2007, 51 (01) :382-386
[5]   Wild bird influenza survey, Canada, 2005 [J].
Parmley, E. Jane ;
Bastien, Nathalie ;
Booth, Timothy F. ;
Bowes, Victoria ;
Buck, Peter A. ;
Breault, Andre ;
Caswell, Dale ;
Daoust, Pierre-Yves ;
Davies, J. Chris ;
Elahi, Seyyed Mehdy ;
Fortin, Madeleine ;
Kibenge, Fred ;
King, Robin ;
Li, Yan ;
North, Norman ;
Ojkic, Davor ;
Pasick, John ;
Pryor, Sydney Paul ;
RobInson, John ;
Rodrigue, Jean ;
Whitney, Hugh ;
Zimmer, Patrick ;
Leighton, Frederick A. .
EMERGING INFECTIOUS DISEASES, 2008, 14 (01) :84-87
[6]   The roles of national and provincial diagnostic laboratories in the eradication of highly pathogenic H7N3 avian influenza virus from the Fraser Valley of British Columbia, Canada [J].
Pasick, John ;
Robinson, John ;
Hooper-McGrevy, Kathleen ;
Wright, Peter ;
Kitching, Paul ;
Handel, Katherine ;
Copps, John ;
Ridd, Deidre ;
Kehler, Helen ;
Hills, Kevin ;
Cottam-Birt, Colleen .
AVIAN DISEASES, 2007, 51 (01) :309-312
[7]   Development of a real-time reverse transcriptase PCR assay for type A influenza virus and the avian H5 and H7 hemagglutinin subtypes [J].
Spackman, E ;
Senne, DA ;
Myers, TJ ;
Bulaga, LL ;
Garber, LP ;
Perdue, ML ;
Lohman, K ;
Daum, LT ;
Suarez, DL .
JOURNAL OF CLINICAL MICROBIOLOGY, 2002, 40 (09) :3256-3260
[8]   Analytical validation of a real-time reverse transcription polymerase chain reaction test for Pan-American lineage H7 subtype Avian influenza viruses [J].
Spackman, Erica ;
Ip, Hon S. ;
Suarez, David L. ;
Slemons, Richard D. ;
Stallknecht, David E. .
JOURNAL OF VETERINARY DIAGNOSTIC INVESTIGATION, 2008, 20 (05) :612-616
[9]  
SWAYNE DE, 2008, LAB MANUAL ISOLATION