Splicing regulation in hematopoiesis

被引:5
作者
Chen, Sisi [1 ]
Abdel-Wahab, Omar [1 ,2 ]
机构
[1] Mem Sloan Kettering Canc Ctr, Dept Med, Human Oncol & Pathogenesis Program, 1275 York Ave, New York, NY 10021 USA
[2] Mem Sloan Kettering Canc Ctr, Dept Med, Leukemia Serv, 1275 York Ave, New York, NY 10021 USA
关键词
lineage-specific alternative splicing; SRSF2; U2AF1; ZRSR2; CLONAL HEMATOPOIESIS; MINOR CLASS; STEM-CELLS; MUTATIONS; MYELODYSPLASIA; SRSF2; ONCOPROTEINS; INHIBITION; SEQUENCES; PROTEINS;
D O I
10.1097/MOH.0000000000000661
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Purpose of review Splicing mutations are among the most recurrent genetic perturbations in hematological malignancies, highlighting an important impact of splicing regulation in hematopoietic development. However, compared to our understanding of splicing factor mutations in hematological malignancies, studies of splicing components and alternative splicing in normal hematopoiesis have been less well investigated. Here, we outline the most recent findings on splicing regulation in normal hematopoiesis and discuss the important questions in the field. Recent findings Recent studies have highlighted the critical role of splicing regulation in hematopoiesis, including characterization of splicing components in normal hematopoiesis, investigation of transcriptional alterations on splicing, and identification of stage-specific alternative splicing events during hematopoietic development. Summary These interesting findings provide insights on hematopoietic regulation at a co-transcriptional level. More high-throughput RNA ribonucleic acid (RNA) sequencing and functional genomic screens are needed to advance our knowledge of critical alternative splicing patterns in shaping hematopoiesis.
引用
收藏
页码:277 / 283
页数:7
相关论文
共 68 条
  • [1] Prediction of acute myeloid leukaemia risk in healthy individuals
    Abelson, Sagi
    Collord, Grace
    Ng, Stanley W. K.
    Weissbrod, Omer
    Cohen, Netta Mendelson
    Niemeyer, Elisabeth
    Barda, Noam
    Zuzarte, Philip C.
    Heisler, Lawrence
    Sundaravadanam, Yogi
    Luben, Robert
    Hayat, Shabina
    Wang, Ting Ting
    Zhao, Zhen
    Cirlan, Julia
    Pugh, Trevor J.
    Soave, David
    Ng, Karen
    Latimer, Calli
    Hardy, Claire
    Raine, Keiran
    Jones, David
    Hoult, Diana
    Britten, Abigail
    McPherson, John D.
    Johansson, Mattias
    Mbabaali, Faridah
    Eagles, Jenna
    Millers, Jessica K.
    Pasternack, Danielle
    Timms, Lee
    Krzyzanowski, Paul
    Awadalla, Philip
    Costa, Rui
    Segal, Eran
    Bratman, Scott, V
    Beer, Philip
    Behjati, Sam
    Martincorena, Inigo
    Wang, Jean C. Y.
    Bowles, Kristian M.
    Ramon Quiros, J.
    Karakatsani, Anna
    La Vecchia, Carlo
    Trichopoulou, Antonia
    Salamanca-Fernandez, Elena
    Huerta, Jose M.
    Barricarte, Aurelio
    Travis, Ruth C.
    Tumino, Rosario
    [J]. NATURE, 2018, 559 (7714) : 400 - +
  • [2] Functional analysis of the human CDC5L complex and identification of its components by mass spectrometry
    Ajuh, P
    Kuster, B
    Panov, K
    Zomerdijk, JCBM
    Mann, M
    Lamond, AI
    [J]. EMBO JOURNAL, 2000, 19 (23) : 6569 - 6581
  • [3] U12DB: a database of orthologous U12-type spliceosomal introns
    Alioto, Tyler S.
    [J]. NUCLEIC ACIDS RESEARCH, 2007, 35 : D110 - D115
  • [4] LZTR1 is a regulator of RAS ubiquitination and signaling
    Bigenzahn, Johannes W.
    Collie, Giovanna M.
    Kartnig, Felix
    Pieraks, Melanie
    Vladimer, Gregory, I
    Heinez, Leonhard X.
    Sedlyarov, Vitaly
    Schischlik, Fiorella
    Fauster, Astrid
    Rebsamen, Manuele
    Parapatics, Katja
    Blomen, Vincent A.
    Muller, Andre C.
    Winter, Georg E.
    Kralovics, Robert
    Brunlinelkamp, Thijn R.
    Mlodzik, Marek
    Superti-Furga, Giulio
    [J]. SCIENCE, 2018, 362 (6419) : 1171 - +
  • [5] RIT1 oncoproteins escape LZTR1-mediated proteolysis
    Castel, Pau
    Cheng, Alice
    Cuevas-Navarro, Antonio
    Everman, David B.
    Papageorge, Alex G.
    Simanshu, Dhirendra K.
    Tankka, Alexandra
    Galeas, Jacqueline
    Urisman, Anatoly
    McCormick, Frank
    [J]. SCIENCE, 2019, 363 (6432) : 1226 - 1229
  • [6] Splicing variation of BMP2K balances abundance of COPII assemblies and autophagic degradation in erythroid cells
    Cendrowski, Jaroslaw
    Kaczmarek, Marta
    Mazur, Michal
    Kuzmicz-Kowalska, Katarzyna
    Jastrzebski, Kamil
    Brewinska-Olchowik, Marta
    Kominek, Agata
    Piwocka, Katarzyna
    Miaczynska, Marta
    [J]. ELIFE, 2020, 9
  • [7] A CLK3-HMGA2 Alternative Splicing Axis Impacts Human Hematopoietic Stem Cell Molecular Identity throughout Development
    Cesana, Marcella
    Guo, Michael H.
    Cacchiarelli, Davide
    Wahlster, Lara
    Barragan, Jessica
    Doulatov, Sergei
    Vo, Linda T.
    Salvatori, Beatrice
    Trapnell, Cole
    Clement, Kendell
    Cahan, Patrick
    Tsanov, Kaloyan M.
    Sousa, Patricia M.
    Tazon-Vega, Barbara
    Bolondi, Adriano
    Giorgi, Federico M.
    Califano, Andrea
    Rinn, John L.
    Meissner, Alexander
    Hirschhorn, Joel N.
    Daley, George Q.
    [J]. CELL STEM CELL, 2018, 22 (04) : 575 - +
  • [8] Transcriptional diversity during lineage commitment of human blood progenitors
    Chen, Lu
    Kostadima, Myrto
    Martens, Joost H. A.
    Canu, Giovanni
    Garcia, Sara P.
    Turro, Ernest
    Downes, Kate
    Macaulay, Iain C.
    Bielczyk-Maczynska, Ewa
    Coe, Sophia
    Farrow, Samantha
    Poudel, Pawan
    Burden, Frances
    Jansen, Sjoert B. G.
    Astle, William J.
    Attwood, Antony
    Bariana, Tadbir
    de Bono, Bernard
    Breschi, Alessandra
    Chambers, John C.
    Choudry, Fizzah A.
    Clarke, Laura
    Coupland, Paul
    van der Ent, Martijn
    Erber, Wendy N.
    Jansen, Joop H.
    Favier, Remi
    Fenech, Matthew E.
    Foad, Nicola
    Freson, Kathleen
    van Geet, Chris
    Gomez, Keith
    Guigo, Roderic
    Hampshire, Daniel
    Kelly, Anne M.
    Kerstens, Hindrik H. D.
    Kooner, Jaspal S.
    Laffan, Michael
    Lentaigne, Claire
    Labalette, Charlotte
    Martin, Tiphaine
    Meacham, Stuart
    Mumford, Andrew
    Nuernberg, Sylvia
    Palumbo, Emilio
    van der Reijden, Bert A.
    Richardson, David
    Sammut, Stephen J.
    Slodkowicz, Greg
    Tamuri, Asif U.
    [J]. SCIENCE, 2014, 345 (6204) : 1580 - +
  • [9] BCAS2 is essential for Drosophila viability and functions in pre-mRNA splicing
    Chen, Po-Han
    Lee, Chia-I
    Weng, Yu-Tzu
    Tarn, Woan-Yuh
    Tsao, Yeou-Ping
    Kuo, Ping-Chang
    Hsu, Pang-Hung
    Huang, Chu-Wei
    Huang, Chiun-Sheng
    Lee, Hsiu-Hsiang
    Wu, June-Tai
    Chen, Show-Li
    [J]. RNA, 2013, 19 (02) : 208 - 218
  • [10] BCAS2 Regulates Delta-Notch Signaling Activity through Delta Pre-mRNA Splicing in Drosophila Wing Development
    Chou, Meng-Hsuan
    Hsieh, Yi-Chen
    Huang, Chu-Wei
    Chen, Po-Han
    Chan, Shih-Peng
    Tsao, Yeou-Ping
    Lee, Hsiu-Hsiang
    Wu, June-Tai
    Chen, Show-Li
    [J]. PLOS ONE, 2015, 10 (06):