The origin and adaptive evolution of domesticated populations of yeast from Far East Asia

被引:166
作者
Duan, Shou-Fu [1 ,2 ]
Han, Pei-Jie [1 ]
Wang, Qi-Ming [1 ]
Liu, Wan-Qiu [1 ]
Shi, Jun-Yan [1 ,2 ]
Li, Kuan [1 ]
Zhang, Xiao-Ling [1 ]
Bai, Feng-Yan [1 ,2 ]
机构
[1] Chinese Acad Sci, Inst Microbiol, State Key Lab Mycol, Beijing 100101, Peoples R China
[2] Univ Chinese Acad Sci, Coll Life Sci, 19 A Yuquan Rd, Beijing 100049, Peoples R China
基金
中国国家自然科学基金;
关键词
SACCHAROMYCES-CEREVISIAE; REPRODUCTIVE ISOLATION; DIVERGED POPULATIONS; SEQUENCE DIVERSITY; GENETIC DIVERSITY; GENOME; WILD; BEER; WINE; ALIGNMENT;
D O I
10.1038/s41467-018-05106-7
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The yeast Saccharomyces cerevisiae has been an essential component of human civilization because of its long global history of use in food and beverage fermentation. However, the diversity and evolutionary history of the domesticated populations of the yeast remain elusive. We show here that China/Far East Asia is likely the center of origin of the domesticated populations of the species. The domesticated populations form two major groups associated with solid-and liquid-state fermentation and appear to have originated from heterozygous ancestors, which were likely formed by outcrossing between diverse wild isolates primitively for adaptation to maltose-rich niches. We found consistent gene expansion and contraction in the whole domesticated population, as well as lineage-specific genome variations leading to adaptation to different environments. We show a nearly panoramic view of the diversity and life history of S. cerevisiae and provide new insights into the origin and evolution of the species.
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页数:13
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