Transcriptomic responses to heat stress in gill and liver of endangered Brachymystax lenok tsinlingensis

被引:19
作者
Li, Ping [1 ,2 ,3 ]
Liu, Qigen [1 ,2 ,3 ]
Li, Jiale [2 ,3 ]
Wang, Feng [4 ]
Wen, Sien [4 ]
Li, Ning [5 ]
机构
[1] Shanghai Ocean Univ, Minist Agr & Rural Affairs, Ctr Res Environm Ecol & Fish Nutr, Shanghai 201306, Peoples R China
[2] Shanghai Ocean Univ, Minist Agr & Rural Affairs, Key Lab Freshwater Aquat Genet Resources, Shanghai 201306, Peoples R China
[3] Shanghai Ocean Univ, Natl Demonstrat Ctr Expt Fisheries Sci Educ, Shanghai 201306, Peoples R China
[4] Chinese Acad Fishery Sci, Yellow River Fisheries Res Inst, Xian 710086, Peoples R China
[5] Univ Southern Calif, Dept Biol Sci, Los Angeles, CA 90089 USA
来源
COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS | 2021年 / 38卷
关键词
Cold-water fish; Conservation; Heat tolerance; Thermal limit; Thermal stress; RNA-SEQ DATA; CLIMATE-CHANGE; GENETIC DIVERSITY; TEMPERATURE; ANNOTATION; TROUT; INSIGHTS; POPULATIONS; SALMONIDAE; PROVIDES;
D O I
10.1016/j.cbd.2021.100791
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Global warming significantly affects fish, particularly cold-water fish, because increased temperature adversely impacts their abilities to grow or reproduce, and eventually influences their fitness or even causes death. To survive, fish may alter their distribution or behavior to avoid the stress, and perhaps acclimate or evolve resistance to the elevated temperature. Brachymystax lenok tsinlingensis is an endangered cold-water species in China, and it has been found to alter the altitudinal distribution, decrease swimming efficiency and develop resistance under heat exposure, which badly impact the continuing conservation work. To better protect them, it is essential to understand how they respond to thermal stress behaviorally and physiologically. Therefore, the fish were exposed to 24.5 degrees C and based on the time taken for them to lose equilibrium, they were separately sampled as sensitive and tolerant groups. Both gill and liver tissues were collected from both groups for transcriptome sequencing. Sequencing results demonstrated that control and tolerant groups were similar in transcriptomic patterns and sensitive groups differentially expressed more genes than tolerant ones, suggesting the gene expression of tolerant groups may return to base levels as exposure time increased. Tissue differences were the major factor affecting gene expression, and they also displayed different physiological responses to heat stress. Consistent with other studies, heat shock response, immune response, metabolic adjustment and ion transport were found to be triggered after exposed to elevated temperature. The findings would contribute to a better understanding of responding mechanisms of fish to thermal stress and provide guidance for future conservation programs.
引用
收藏
页数:8
相关论文
共 58 条
[1]  
Angilletta MJ, 2009, BIO HABIT, P1, DOI 10.1093/acprof:oso/9780198570875.001.1
[2]   Transcriptional response to heat shock in liver of snow trout (Schizothorax richardsonii)-a vulnerable Himalayan Cyprinid fish [J].
Barat, Ashoktaru ;
Sahoo, Prabhati Kumari ;
Kumar, Rohit ;
Goel, Chirag ;
Singh, Atul Kumar .
FUNCTIONAL & INTEGRATIVE GENOMICS, 2016, 16 (02) :203-213
[3]  
BEITINGER TL, 1979, AM ZOOL, V19, P319
[4]   CONTROLLING THE FALSE DISCOVERY RATE - A PRACTICAL AND POWERFUL APPROACH TO MULTIPLE TESTING [J].
BENJAMINI, Y ;
HOCHBERG, Y .
JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY, 1995, 57 (01) :289-300
[5]   RNA-seq analyses of cellular responses to elevated body temperature in the high Antarctic cryopelagic nototheniid fish Pagothenia borchgrevinki [J].
Bilyk, Kevin T. ;
Cheng, C-H Christina .
MARINE GENOMICS, 2014, 18 :163-171
[6]   Transcriptome profiling and histology changes in juvenile blunt snout bream (Megalobrama amblycephala) liver tissue in response to acute thermal stress [J].
Bing Li ;
Sun, Shengming ;
Jian Zhu ;
Su Yanli ;
Zhang Wuxiao ;
Ge, Xianping .
GENOMICS, 2019, 111 (03) :242-250
[7]   Influence of summer stream temperatures on black spot infestation of juvenile coho salmon in the Oregon Coast Range [J].
Cairns, MA ;
Ebersole, JL ;
Baker, JP ;
Wigington, PJ ;
Lavigne, HR ;
Davis, SM .
TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY, 2005, 134 (06) :1471-1479
[8]  
Chen Y., 1998, CHINA RED DATA BOOK, P95
[9]   Blast2GO:: a universal tool for annotation, visualization and analysis in functional genomics research [J].
Conesa, A ;
Götz, S ;
García-Gómez, JM ;
Terol, J ;
Talón, M ;
Robles, M .
BIOINFORMATICS, 2005, 21 (18) :3674-3676
[10]   Thermal bottlenecks in the life cycle define climate vulnerability of fish [J].
Dahlke, Flemming T. ;
Wohlrab, Sylke ;
Butzin, Martin ;
Poertner, Hans-Otto .
SCIENCE, 2020, 369 (6499) :65-+