The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis

被引：1159

作者：

Cole, JR ^{[1
]}

Chai, B

Farris, RJ

Wang, Q

Kulam, SA

McGarrell, DM

Garrity, GM

Tiedje, JM

机构：

[1] Michigan State Univ, Ctr Microbial Ecol, E Lansing, MI 48824 USA

[2] Michigan State Univ, Dept Microbiol & Mol Genet, E Lansing, MI 48824 USA

来源：

NUCLEIC ACIDS RESEARCH | 2005年 / 33卷

基金：

美国国家科学基金会;

关键词：

D O I：

10.1093/nar/gki038

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

The Ribosomal Database Project (RDP-II) provides the research community with aligned and annotated rRNA gene sequences, along with analysis services and a phylogenetically consistent taxonomic framework for these data. Updated monthly, these services are made available through the RDP-II website (http://rdp.cme.msu.edu/). RDP-II release 9.21 (August 2004) contains 101632 bacterial small subunit rRNA gene sequences in aligned and annotated format. High-throughput tools for initial taxonomic placement, identification of related sequences, probe and primer testing, data navigation and subalignment download are provided. The RDP-II email address for questions or comments is rdpstaff@msu.edu.

引用

页码：D294 / D296

页数：3

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