Association between Single Nucleotide Polymorphisms in the ADD3 Gene and Susceptibility to Biliary Atresia

被引:27
作者
Zeng, Shuaidan [1 ,2 ]
Sun, Peng [1 ,2 ]
Chen, Zimin [2 ]
Mao, Jianxiong [2 ]
Wang, Jianyao [2 ]
Wang, Bin [2 ]
Liu, Lei [1 ,2 ]
机构
[1] Zunyi Med Coll, Zhuhai, Guangdong, Peoples R China
[2] Shenzhen Childrens Hosp, Dept Gen Surg, Shenzhen, Guangdong, Peoples R China
关键词
NEONATAL CHOLESTASIS; BILE CANALICULI;
D O I
10.1371/journal.pone.0107977
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Background and Objectives: Based on the results of previous studies, the ADD3 gene, located in the 10q24.2 region, may be a susceptibility gene of biliary atresia (BA). In this study, two single nucleotide polymorphisms (SNPs) in the ADD3 gene, rs17095355 C/T and rs10509906 G/C, were selected to investigate whether there is an association between these SNPs and susceptibility to BA in a Chinese population. Methods: A total of 752 Han Chinese (134 BA cases and 618 ethnically matched healthy controls) were included in the present study. The ADD3 gene polymorphisms were genotyped using a TaqMan genotyping assay. Results: Positive associations were found for the SNp rs17095355 in the codominant model; specifically, the frequencies of the CT and TT genotypes and the T allele were higher in the cases than the controls, demonstrating a significant risk for BA (odds ratio [OR] = 1.62, 95% confidence interval [CI] = 1.02-2.58; OR = 2.89, 95% CI = 1.72-4.86; and OR = 1.75, 95% CI = 1.34-2.29, respectively). Regarding rs10509906, the per-C-allele conferred an OR of 0.70 (95% CI = 0.49-1.00) under the additive model. A greater risk of BA was associated with the T-a-(G)b (a for rs17095355 and b for rs10509906) haplotype (OR = 1.82, 95% CI = 1.27-2.61) compared with the C-a-C-b haplotype. Conclusion: This study suggests that the ADD3 gene plays an important role in BA pathogenesis and reveals a significant association between two SNPs, rs17095355 and rs10509906, and BA.
引用
收藏
页数:5
相关论文
共 21 条
[1]  
[Anonymous], PEDIAT SURG DIAGNOSI
[2]   Positive association of macrophage migration inhibitory factor gene-173G/C polymorphism with biliary atresia [J].
Arikan, C ;
Berdeli, A ;
Ozgenc, F ;
Tumgor, G ;
Yagci, RV ;
Aydogdu, S .
JOURNAL OF PEDIATRIC GASTROENTEROLOGY AND NUTRITION, 2006, 42 (01) :77-82
[3]   Polymorphisms of the ICAM-1 gene are associated with biliary atresia [J].
Arikan, Cigdem ;
Berdeli, Afig ;
Kilic, Murat ;
Tumgor, Gokhan ;
Yagci, Rasit V. ;
Aydogdu, Sema .
DIGESTIVE DISEASES AND SCIENCES, 2008, 53 (07) :2000-2004
[4]   Common genetic variants regulating ADD3 gene expression alter biliary atresia risk [J].
Cheng, Guo ;
Tang, Clara Sze-Man ;
Wong, Emily Hoi-Man ;
Cheng, William Wai-Chun ;
So, Man-Ting ;
Miao, Xiaoping ;
Zhang, Ruizhong ;
Cui, Long ;
Liu, Xuelai ;
Ngan, Elly Sau-Wai ;
Lui, Vincent Chi-Hang ;
Chung, Patrick Ho-Yu ;
Chan, Ivy Hau-Yee ;
Liu, Juncheng ;
Zhong, Wei ;
Xia, Huimin ;
Yu, Jiakang ;
Qiu, Xiu ;
Wu, Xuan-Zhao ;
Wang, Bin ;
Dong, Xiao ;
Tou, Jinfa ;
Huang, Liuming ;
Yi, Bin ;
Ren, Hongxia ;
Chan, Edwin Kin-Wai ;
Ye, Kenny ;
O'Reilly, Paul F. ;
Wong, Kenneth Kak-Yuen ;
Sham, Pak-Chung ;
Cherny, Stacey S. ;
Tam, Paul Kwong-Hang ;
Garcia-Barcelo, Maria-Merce .
JOURNAL OF HEPATOLOGY, 2013, 59 (06) :1285-1291
[5]  
Chuang Jiin-Haur, 2006, Chang Gung Med J, V29, P240
[6]   The viral association of neonatal cholestasis in Sweden: A possible link between cytomegalovirus infection and extrahepatic biliary atresia [J].
Fischler, B ;
Ehrnst, A ;
Forsgren, M ;
Orvell, C ;
Nemeth, A .
JOURNAL OF PEDIATRIC GASTROENTEROLOGY AND NUTRITION, 1998, 27 (01) :57-64
[7]   Genome-wide association study identifies a susceptibility locus for biliary atresia on 10q24.2 [J].
Garcia-Barcelo, Maria-Merce ;
Yeung, Ming-Yiu ;
Miao, Xiao-Ping ;
Tang, Clara Sze-Man ;
Chen, Guo ;
So, Man-Ting ;
Ngan, Elly Sau-Wai ;
Lui, Vincent Chi-Hang ;
Chen, Yan ;
Liu, Xue-Lai ;
Hui, Kenneth-Jeremy W. S. ;
Li, Long ;
Guo, Wei-Hong ;
Sun, Xiao-Bin ;
Tou, Jin-Fa ;
Chan, Kin-Wai ;
Wu, Xuan-Zhao ;
Song, You-Qiang ;
Chan, Danny ;
Cheung, Kenneth ;
Chung, Patrick Ho-Yu ;
Wong, Kenneth Kak-Yuen ;
Sham, Pak-Chung ;
Cherny, Stacey S. ;
Tam, Paul Kwong-Hang .
HUMAN MOLECULAR GENETICS, 2010, 19 (14) :2917-2925
[8]   Association of X-prolyl aminopeptidase 1 rs17095355 polymorphism with biliary atresia in Thai children [J].
Kaewkiattiyot, Sarannut ;
Honsawek, Sittisak ;
Vejchapipat, Paisarn ;
Chongsrisawat, Voranush ;
Poovorawan, Yong .
HEPATOLOGY RESEARCH, 2011, 41 (12) :1249-1252
[9]   Adducins Regulate Remodeling of Apical Junctions in Human Epithelial Cells [J].
Naydenov, Nayden G. ;
Ivanov, Andrei I. .
MOLECULAR BIOLOGY OF THE CELL, 2010, 21 (20) :3506-3517
[10]   CONTRACTILITY OF BILE CANALICULI - IMPLICATIONS FOR LIVER-FUNCTION [J].
OSHIO, C ;
PHILLIPS, MJ .
SCIENCE, 1981, 212 (4498) :1041-1042