Gene Expression Differences in Pediatric Lymphatic Malformations: Size Really Matters

被引:13
作者
Gomez-Acevedo, Horacio [1 ]
Dornhoffer, James R. [2 ]
Stone, Annjanette [3 ,4 ]
Dai, Yuemeng [5 ]
Richter, Gresham T. [6 ,7 ]
机构
[1] Univ Arkansas Med Sci, Dept Biomed Informat, Little Rock, AR 72205 USA
[2] Med Univ South Carolina, Dept Otolaryngol Head & Neck Surg, Charleston, SC 29425 USA
[3] Univ Arkansas Med Sci, Dept Pathol, Little Rock, AR 72205 USA
[4] Cent Arkansas Vet Healthcare Syst, Little Rock, AR USA
[5] Mesquite Rehabil Inst, Mesquite, TX USA
[6] Univ Arkansas Med Sci, Dept Otolaryngol, Little Rock, AR 72205 USA
[7] Arkansas Childrens Hosp, 1 Childrens Way 836, Little Rock, AR 72202 USA
关键词
lymphatic malformations; macrocystic lymphatic malformation; microcystic lymphatic malformation; gene microarray; pediatric lymphatic malformations; PIK3CA ALLELES; CELLS;
D O I
10.1089/lrb.2017.0064
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
Lymphatic malformations (LMs) are congenital vascular anomalies characterized by dilated and cystic lymphatic channels. They are subdivided into macrocystic and microcystic lesions based upon the predominant size of the cysts involved. However, significant differences in clinical characteristics, treatment outcomes, and prognosis between macrocytic and microcytic disease suggest variation in underlying biologic and genetic influences. Indirect differential expression analysis revealed that 426 genes are significantly different (p < 0.01) in a small sample of LM subtypes. Functional analyses on the differentially expressed gene sets showed that microcystic LM gene expression favors a prooncogenic profile with upregulation of MYC target genes and cell cycle proteins, whereas macrocystic expression demonstrates hypoxic events that lead to angiogenesis and cell proliferation. Therefore, microcystic and macrocystic LMs, although histologically and physiologically similar, may occur under the influence of vastly different biological pathways and mechanisms of action.
引用
收藏
页码:347 / 352
页数:6
相关论文
共 28 条
[11]   Nm23-H1 suppresses tumor cell motility by down-regulating the lysophosphatidic acid receptor EDG2 [J].
Horak, Christine E. ;
Lee, Jong Heun ;
Elkahloun, Abdel G. ;
Boissan, Mathieu ;
Dumont, Sylvie ;
Maga, Tara K. ;
Arnaud-Dabernat, Sandrine ;
Palmieri, Diane ;
Stetler-Stevenson, William G. ;
Lacombe, Marie-Lise ;
Meltzer, Paul S. ;
Steeg, Patricia S. .
CANCER RESEARCH, 2007, 67 (15) :7238-7246
[12]   DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists [J].
Huang, Da Wei ;
Sherman, Brad T. ;
Tan, Qina ;
Kir, Joseph ;
Liu, David ;
Bryant, David ;
Guo, Yongjian ;
Stephens, Robert ;
Baseler, Michael W. ;
Lane, H. Clifford ;
Lempicki, Richard A. .
NUCLEIC ACIDS RESEARCH, 2007, 35 :W169-W175
[13]   Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists [J].
Huang, Da Wei ;
Sherman, Brad T. ;
Lempicki, Richard A. .
NUCLEIC ACIDS RESEARCH, 2009, 37 (01) :1-13
[14]   Hypoxia and lymphangiogenesis in tumor microenvironment and metastasis [J].
Ji, Rui-Cheng .
CANCER LETTERS, 2014, 346 (01) :6-16
[15]   CDC20, a potential cancer therapeutic target, is negatively regulated by p53 [J].
Kidokoro, T. ;
Tanikawa, C. ;
Furukawa, Y. ;
Katagiri, T. ;
Nakamura, Y. ;
Matsuda, K. .
ONCOGENE, 2008, 27 (11) :1562-1571
[16]   CAP2 is a regulator of the actin cytoskeleton and its absence changes infiltration of inflammatory cells and contraction of wounds [J].
Kosmas, Kosmas ;
Eskandarnaz, Ali ;
Khorsandi, Arya B. ;
Kumar, Atul ;
Ranjan, Rajeev ;
Eming, Sabine A. ;
Noegel, Angelika A. ;
Peche, Vivek S. .
EUROPEAN JOURNAL OF CELL BIOLOGY, 2015, 94 (01) :32-45
[17]   Regulation of mitotic progression by the spindle assembly checkpoint [J].
Lischetti, Tiziana ;
Nilsson, Jakob .
MOLECULAR & CELLULAR ONCOLOGY, 2015, 2 (01)
[18]  
Luks VL, 2015, J PEDIAT, V166
[19]   HEMANGIOMAS AND VASCULAR MALFORMATIONS IN INFANTS AND CHILDREN - A CLASSIFICATION BASED ON ENDOTHELIAL CHARACTERISTICS [J].
MULLIKEN, JB ;
GLOWACKI, J .
PLASTIC AND RECONSTRUCTIVE SURGERY, 1982, 69 (03) :412-420
[20]   Activating PIK3CA alleles and lymphangiogenic phenotype of lymphatic endothelial cells isolated from lymphatic malformations [J].
Osborn, Alexander J. ;
Dickie, Peter ;
Neilson, Derek E. ;
Glaser, Kathryn ;
Lynch, Kaari A. ;
Gupta, Anita ;
Dickie, Belinda Hsi .
HUMAN MOLECULAR GENETICS, 2015, 24 (04) :926-938