Genome-Wide Identification, Classification, and Expression Divergence of Glutathione-Transferase Family in Brassica rapa under Multiple Hormone Treatments

被引:23
作者
Khan, Nadeem [1 ]
Hu, Chun-mei [1 ,2 ]
Khan, Waleed Amjad [1 ]
Hou, Xilin [1 ]
机构
[1] Nanjing Agr Univ, Coll Hort, Minist Sci & Technol, State Key Lab Crop Genet & Germplasm Enhancement, Nanjing 210095, Jiangsu, Peoples R China
[2] Nanjing Agr Univ, New Rural Res Inst Lianyungang, Nanjing 210095, Jiangsu, Peoples R China
关键词
DEHYDROASCORBATE REDUCTASE GENE; S-TRANSFERASE; ARABIDOPSIS-THALIANA; SUPERGENE FAMILY; FUNCTIONAL DIVERGENCE; EVOLUTIONARY DYNAMICS; STRESS-TOLERANCE; DUPLICATE GENES; SALT STRESS; PLANTS;
D O I
10.1155/2018/6023457
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The GSTs is one of the most important multifunctional protein families which has been playing a crucial role in the different aspects of plant growth. This extensive study about GSTs may establish a solid foundation for the brief functional analysis of BraGSTs in future. In this study, a total of 75 genes were identified in B. rapa. Phylogenetic analysis characterized them into eight different subclasses, while Tau and Phi subclasses were the most numerous. The exon-intron structure and the motif composition of BraGSTs were exhibited accordingly to their subclasses. Notably, we also investigated 15 tandem paralogous pairs of genes, which highlighted that all the pairs were purifying in nature as their synonymous values were lower than 1.00. Duplication analysis indicated that about 45.33% of genes mainly occurred through tandem duplication in B. rapa. Predominately, the tandem cluster of genes in subclass Tau was greater than the other subclasses. Furthermore, among eight multiple hormonal treatments (ABA, GA, BR, ETH, IAA, IBA, NPA, and JA), most number of BraGSTs was activated by NPA, BR, and ABA treatments. This analysis has provided comprehensive information about GSTs family which may assist in elucidating their exact functions in B. rapa.
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页数:19
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