H3K4me3 epigenomic landscape derived from ChIP-Seq of 1 000 mouse early embryonic cells

被引:14
作者
Shen, Jie [1 ,2 ,3 ]
Jiang, Dongqing [1 ,3 ]
Fu, Yusi [1 ,3 ]
Wu, Xinglong [1 ,3 ]
Guo, Hongshan [1 ,3 ]
Feng, Binxiao [1 ]
Pang, Yuhong [1 ,3 ]
Streets, Aaron M. [1 ,2 ]
Tang, Fuchou [1 ,3 ]
Huang, Yanyi [1 ,2 ]
机构
[1] Peking Univ, Biodynam Opt Imaging Ctr BIOPIC, Beijing 100871, Peoples R China
[2] Peking Univ, Coll Engn, Beijing 100871, Peoples R China
[3] Peking Univ, Sch Life Sci, Beijing 100871, Peoples R China
关键词
LINEAR DNA AMPLIFICATION; IN-VIVO; GENOME;
D O I
10.1038/cr.2014.119
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
引用
收藏
页码:143 / 147
页数:5
相关论文
共 15 条
  • [1] Adli M, 2010, NAT METHODS, V7, P615, DOI [10.1038/NMETH.1478, 10.1038/nmeth.1478]
  • [2] The complex language of chromatin regulation during transcription
    Berger, Shelley L.
    [J]. NATURE, 2007, 447 (7143) : 407 - 412
  • [3] ChIP-seq and beyond: new and improved methodologies to detect and characterize protein-DNA interactions
    Furey, Terrence S.
    [J]. NATURE REVIEWS GENETICS, 2012, 13 (12) : 840 - 852
  • [4] Limitations and possibilities of low cell number ChIP-seq
    Gilfillan, Gregor D.
    Hughes, Timothy
    Sheng, Ying
    Hjorthaug, Hanne S.
    Straub, Tobias
    Gervin, Kristina
    Harris, Jennifer R.
    Undlien, Dag E.
    Lyle, Robert
    [J]. BMC GENOMICS, 2012, 13
  • [5] Next-generation genomics: an integrative approach
    Hawkins, R. David
    Hon, Gary C.
    Ren, Bing
    [J]. NATURE REVIEWS GENETICS, 2010, 11 (07) : 476 - 486
  • [6] Dissecting biological "dark matter" with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth
    Marcy, Yann
    Ouverney, Cleber
    Bik, Elisabeth M.
    Loesekann, Tina
    Ivanova, Natalia
    Martin, Hector Garcia
    Szeto, Ernest
    Platt, Darren
    Hugenholtz, Philip
    Relman, David A.
    Quake, Stephen R.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2007, 104 (29) : 11889 - 11894
  • [7] In Vivo Epigenomic Profiling of Germ Cells Reveals Germ Cell Molecular Signatures
    Ng, Jia-Hui
    Kumar, Vibhor
    Muratani, Masafumi
    Kraus, Petra
    Yeo, Jia-Chi
    Yaw, Lai-Ping
    Xue, Kun
    Lufkin, Thomas
    Prabhakar, Shyam
    Ng, Huck-Hui
    [J]. DEVELOPMENTAL CELL, 2013, 24 (03) : 324 - 333
  • [8] Comparison of sample preparation methods for ChIP-chip assays
    O'Geen, Henriette
    Nicolet, Charles M.
    Blahnik, Kim
    Green, Roland
    Farnham, Peggy J.
    [J]. BIOTECHNIQUES, 2006, 41 (05) : 577 - 580
  • [9] ChIP-seq: advantages and challenges of a maturing technology
    Park, Peter J.
    [J]. NATURE REVIEWS GENETICS, 2009, 10 (10) : 669 - 680
  • [10] Bivalent Chromatin Marks Developmental Regulatory Genes in the Mouse Embryonic Germline In Vivo
    Sachs, Michael
    Onodera, Courtney
    Blaschke, Kathryn
    Ebata, Kevin T.
    Song, Jun S.
    Ramalho-Santos, Miguel
    [J]. CELL REPORTS, 2013, 3 (06): : 1777 - 1784