The Power of Systems Biology Insights on Lupus Nephritis from the Accelerating Medicines Partnership

被引:9
作者
Fava, Andrea [1 ]
Raychaudhuri, Soumya [2 ,3 ,4 ,5 ]
Rao, Deepak A. [2 ]
机构
[1] Johns Hopkins Univ, Div Rheumatol, 1830 East Monument St,Suite 7500, Baltimore, MD 21205 USA
[2] Harvard Med Sch, Brigham & Womens Hosp, Dept Med, Div Rheumatol Inflammat Immun, Boston, MA 02115 USA
[3] Brigham & Womens Hosp, Bldg Transformat Med, Ctr Data Sci, 60 Fenwood Rd, Boston, MA 02115 USA
[4] Broad Inst MIT & Harvard, Program Med & Populat Genet, Cambridge, MA 02142 USA
[5] Univ Manchester, Manchester Acad Hlth Sci Ctr, Ctr Musculoskeletal Res, Ctr Genet & Genom Versus Arthrit, Oxford Rd, Manchester, Lancs, England
关键词
Lupus nephritis; SLE; Accelerating medicines partnership; AMP; scRNA-seq; Proteomics; Transcriptomics; Biomarker; GENOME-WIDE EXPRESSION; SINGLE-CELL; CHROMATIN ACCESSIBILITY; T-CELLS; RNA-SEQ; ERYTHEMATOSUS; REJECTION; OUTCOMES; KIDNEYS; DISEASE;
D O I
10.1016/j.rdc.2021.04.003
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
[No abstract available]
引用
收藏
页码:335 / 350
页数:16
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