The complete mitochondrial genome of Archamia macropterus (Perciformes; Apogonidae) and phylogenetic studies of Perciformes

被引：2

作者：

Pan, Yun ^{[1
]}

Chen, Jian ^{[1
]}

Liu, Chan ^{[1
]}

Zeng, Lin ^{[1
]}

Zhao, Xiangjiong ^{[1
,2
]}

机构：

[1] Zhejiang Ocean Univ, Natl Engn Res Ctr Marine Facil Aquaculture, 1 South Haida Rd, Zhoushan 316022, Zhejiang, Peoples R China

[2] Bur Agr & Rural Affairs Peoples Republ Zhoushan, Zhoushan, Zhejiang, Peoples R China

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 02期

关键词：

Archamia macropterus; mitogenome; phylogenetic tree;

D O I：

10.1080/23802359.2019.1681311

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

The complete mitochondrial genome sequence of Archamia macropterus was determined. The complete mitochondrial genome was 16,513?bp in length and contained 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and 2 non-coding region (the control region and the origin of light strand replication). The overall base composition was A 26.37%, T 25.61%, C 30.80%, and G 17.22%. All protein-coding genes started with an ATG initiation codon, except COI used GTG. With the exception of ND6, all other genes were encoded on the heavy strand, the NJ tree demonstrated that A. macropterus has a closest relationship with Cheilodipterus quinquelineatus and Apogon semilineatus.

引用

页码：3740 / 3741

页数：2

共 6 条

[1] Barnett R, 2012, METHODS MOL BIOL, V840, P13, DOI 10.1007/978-1-61779-516-9_2
[2] Peripatric differentiation among adjacent marine lake and lagoon populations of a coastal fish, Sphaeramia orbicularis (Apogonidae, Perciformes, Teleostei)
Gotoh, Ryo O.
Sekimoto, Hidekatsu
Chiba, Satoru N.
Hanzawa, Naoto
[J]. GENES & GENETIC SYSTEMS, 2009, 84 (04) : 287 - 295
[3] Phung NH, 1998, P 3 INT C MAR BIOL S, V28, P113
[4] MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
Tamura, Koichiro
Peterson, Daniel
Peterson, Nicholas
Stecher, Glen
Nei, Masatoshi
Kumar, Sudhir
[J]. MOLECULAR BIOLOGY AND EVOLUTION, 2011, 28 (10) : 2731 - 2739
[5] Phylogeny of cardinalfishes (Teleostei: Gobiiformes: Apogonidae) and the evolution of visceral bioluminescence
Thacker, Christine E.
Roje, Dawn M.
[J]. MOLECULAR PHYLOGENETICS AND EVOLUTION, 2009, 52 (03) : 735 - 745
[6] Complete mitochondrial genome of yellowback sea bream Evynnis tumifrons
Zeng, Lin
Jiang, Lihua
Xu, Meiying
Wu, Changwen
[J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2016, 1 (01): : 352 - 354

← 1 →