Simulation of the effect of reorientation of hydrogen bonds in proteins on long-range electron transfer

被引:1
作者
Zhdanov, VP [1 ]
机构
[1] Chalmers Univ Technol, Dept Appl Phys, S-41296 Gothenburg, Sweden
[2] Russian Acad Sci, Boreskov Inst Catalysis, Novosibirsk 630093, Russia
关键词
electron tunneling; beta sheets; lattice protein models; Monte Carlo simulations;
D O I
10.1007/s10867-004-2597-3
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
We present Monte Carlo simulations illustrating the influence of reorientation of hydrogen bonds in proteins on long-range interprotein electron transfer. The lattice protein model employed mimics the electron donor (or acceptor) interacting with an antiparallel beta sheet. In addition, we take into account harmonic vibrations of the medium and also the dependence of the coupling matrix element on orientation of hydrogen bonds near the donor and/or acceptor. The results obtained show that the interaction between the tunneling electron and amino-acid residues, which are responsible for the formation of hydrogen bonds, may result in broadening the parabolic dependence of the electron-transfer rate constant on the reaction exothermicity and also in deviations from this dependence especially in the cases when the beta sheet is linked with the electron donor.
引用
收藏
页码:365 / 375
页数:11
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