Hydration of B-DNA fragment d(GGGGG). Integral equations theory of liquid

被引：0
|
作者：
Tikhonov, DA
Polozov, RV
Gorelov, AV
Timoshenko, EG
Kuznetsov, YA
Panchenko, LA
Dawson, KA
机构：
[1] UNIV COLL DUBLIN, DEPT CHEM, DUBLIN, IRELAND
[2] MOSCOW MV LOMONOSOV STATE UNIV, DEPT BIOL, MOSCOW 117234, RUSSIA
来源：
BIOFIZIKA | 1997年 / 42卷 / 05期
关键词：
D O I：
暂无
中图分类号：
Q6 [生物物理学];
学科分类号：
071011 ;
摘要：
Based on the numerical algorithm proposed by us in [1] for solving Integral equations of the theory of liquids in the RISM approximation we calculate all of the solvent-solute atom-atom correlation functions for a fragment of the DNA duplex d(GGGGG) in infinitely diluted aqueous solution. The obtained results are compared with available experimental data and results from computer simulations.
引用
收藏
页码：1066 / 1078
页数：13
相关论文
共 50 条
  • [1] Integral equations theory of liquid for studying of hydration of macromolecules
    Tikhonov, DA
    Polozov, RV
    Gorelov, AV
    Timoshenko, EG
    Kuznetsov, YA
    Panchenko, LA
    Dawson, KA
    BIOFIZIKA, 1997, 42 (05): : 1054 - 1065
  • [2] THEORETICAL-STUDY OF HYDRATION OF B-DNA
    PERAHIA, D
    JHON, MS
    PULLMAN, B
    BIOCHIMICA ET BIOPHYSICA ACTA, 1977, 474 (03) : 349 - 362
  • [3] HYDRATION OF METHYLATED AND NONMETHYLATED B-DNA AND Z-DNA
    HO, PS
    QUIGLEY, GJ
    TILTON, RF
    RICH, A
    JOURNAL OF PHYSICAL CHEMISTRY, 1988, 92 (04): : 939 - 945
  • [4] EFFECTS OF BASE SUBSTITUENTS ON THE HYDRATION OF B-DNA AND Z-DNA - CORRELATIONS TO THE B-DNA TO Z-DNA TRANSITION
    KAGAWA, TF
    HOWELL, ML
    TSENG, KH
    HO, PS
    NUCLEIC ACIDS RESEARCH, 1993, 21 (25) : 5978 - 5986
  • [5] Ion and Solvent Density Distributions around Canonical B-DNA from Integral Equations
    Howard, Jesse J.
    Lynch, Gillian C.
    Pettitt, B. Montgomery
    JOURNAL OF PHYSICAL CHEMISTRY B, 2011, 115 (03): : 547 - 556
  • [6] A molecular simulation picture of DNA hydration around A- and B-DNA
    Feig, M
    Pettitt, BM
    BIOPOLYMERS, 1998, 48 (04) : 199 - 209
  • [7] HELIX GEOMETRY AND HYDRATION IN A-DNA, B-DNA, AND Z-DNA
    DICKERSON, RE
    DREW, HR
    CONNER, BN
    KOPKA, ML
    PJURA, PE
    COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY, 1982, 47 : 13 - 24
  • [8] DIELECTRIC STUDY ON HYDRATION OF B-DNA, A-DNA, AND Z-DNA
    UMEHARA, T
    KUWABARA, S
    MASHIMO, S
    YAGIHARA, S
    BIOPOLYMERS, 1990, 30 (7-8) : 649 - 656
  • [9] B-DNA at atomic resolution reveals extended hydration patterns
    Vlieghe, D
    Turkenburg, JP
    Van Meervelt, L
    ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 1999, 55 : 1495 - 1502
  • [10] STRUCTURE OF A B-DNA DODECAMER .3. GEOMETRY OF HYDRATION
    DREW, HR
    DICKERSON, RE
    JOURNAL OF MOLECULAR BIOLOGY, 1981, 151 (03) : 535 - 556
12345