PhosphoBase: a database of phosphorylation sites

被引：52
作者：
Blom, N
Kreegipuu, A
Brunak, S
机构：
[1] Tech Univ Denmark, Dept Chem, Ctr Biol Sequence Anal, DK-2800 Lyngby, Denmark
[2] Tartu State Univ, Inst Chem Phys, EE-2400 Tartu, Estonia
来源：
NUCLEIC ACIDS RESEARCH | 1998年 / 26卷 / 01期
关键词：
D O I：
10.1093/nar/26.1.382
中图分类号：
Q5 [生物化学]; Q7 [分子生物学];
学科分类号：
071010 ; 081704 ;
摘要：
PhosphoBase is a database of experimentally verified phosphorylation sites. Version 1.0 contains 156 entries and 398 experimentally determined phosphorylation sites. Entries are compiled and revised from the literature and from major protein sequence databases such as SwissProt and PIR. The entries provide information about the phosphoprotein and the exact position of its phosphorylation sites. Furthermore, part of the entries contain information about kinetic data obtained from enzyme assays on specific peptides. To illustrate the use of data extracted from PhosphoBase we present a sequence logo displaying the overall conservation of positions around serines phosphorylated by protein kinase A (PKA). PhosphoBase is available on the WWW at http://www.cbs.dtu.dk/databases/PhosphoBase/.
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页码：382 / 386
页数：5
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