Framework for quantitative three-dimensional choroidal vasculature analysis using optical coherence tomography

被引:10
作者
Saxena, Ashish [1 ,2 ]
Yao, Xinwen [1 ,2 ,3 ]
Wong, Damon [1 ,2 ,3 ]
Chua, Jacqueline [1 ,2 ,4 ]
Ang, Marcus [1 ,4 ]
Hoang, Quan, V [1 ,4 ,5 ,6 ]
Agrawal, Rupesh [1 ,4 ,7 ,8 ]
Girard, Michael [1 ,4 ,12 ]
Cheung, Gemmy [1 ,3 ]
Schmetterer, Leopold [1 ,2 ,3 ,4 ,9 ,10 ,11 ,12 ]
Tan, Bingyao [1 ,2 ,3 ]
机构
[1] Singapore Natl Eye Ctr, Singapore Eye Res Inst, Singapore, Singapore
[2] SERI NTU Adv Ocular Engn STANCE, Singapore, Singapore
[3] NTU Inst Hlth Technol, Singapore, Singapore
[4] Duke NUS Med Sch, Dept Ophthalmol, Singapore, Singapore
[5] Natl Univ Singapore, Yong Loo Lin Sch Med, Dept Ophthalmol, Singapore, Singapore
[6] Columbia Univ Coll Phys & Surg, Dept Ophthalmol, 630 W 168th St, New York, NY 10032 USA
[7] Tan Tock Seng Hosp, Singapore, Singapore
[8] Nanyang Technol Univ, Lee Kong Chian Sch Med, Singapore, Singapore
[9] Nanyang Technol Univ, Sch Chem & Biomed Engn, Singapore, Singapore
[10] Med Univ Vienna, Dept Clin Pharmacol, Vienna, Austria
[11] Med Univ Vienna, Ctr Med Phys & Biomed Engn, Vienna, Austria
[12] Inst Mol & Clin Ophthalmol, CH-4031 Basel, Switzerland
基金
英国医学研究理事会; 新加坡国家研究基金会;
关键词
VESSEL SEGMENTATION; AUTOMATED SEGMENTATION; MACULAR DEGENERATION; AXIAL LENGTH; THICKNESS; IMAGES; CHORIOCAPILLARIS; ENHANCEMENT; REMOVAL; ADULTS;
D O I
10.1364/BOE.426093
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Choroidal vasculature plays an important role in the pathogenesis of retinal diseases, such asmyopic maculopathy, age-related macular degeneration, diabetic retinopathy, central serous chorioretinopathy, and ocular inflammatory diseases. Current optical coherence tomography (OCT) technology provides three-dimensional visualization of the choroidal angioarchitecture; however, quantitative measures remain challenging. Here, we propose and validate a framework to segment and quantify the choroidal vasculature from a prototype swept-source OCT (PLEX Elite 9000, Carl Zeiss Meditec, USA) using a 3x3 mm scan protocol centered on the macula. Enface images referenced from the retinal pigment epithelium were reconstructed from the volumetric data. The boundaries of the choroidal volume were automatically identified by tracking the choroidal vessel feature structure over the depth, and a selective sliding window was applied for segmenting the vessels adaptively from attenuation-corrected enface images. We achieved a segmentation accuracy of 96% +/- 1% as compared with manual annotation, and a dice coefficient of 0.83 +/- 0.04 for repeatability. Using this framework on both control (0.00 D to -2.00 D) and highly myopic (-8.00 D to -11.00 D) eyes, we report a decrease in choroidal vessel volume (p<0.001) in eyes with high myopia. (C) 2021 Optical Society of America under the terms of the OSA Open Access Publishing Agreement
引用
收藏
页码:4982 / 4996
页数:15
相关论文
共 56 条
[1]   Segmentation errors in macular ganglion cell analysis as determined by optical coherence tomography in eyes with macular pathology [J].
Alshareef R.A. ;
Goud A. ;
Mikhail M. ;
Saheb H. ;
Peguda H.K. ;
Dumpala S. ;
Rapole S. ;
Chhablani J. .
International Journal of Retina and Vitreous, 3 (1)
[2]   Imaging in myopia: potential biomarkers, current challenges and future developments [J].
Ang, Marcus ;
Wong, Chee Wai ;
Hoang, Quan V. ;
Cheung, Gemmy Chui Ming ;
Lee, Shu Yen ;
Chia, Audrey ;
Saw, Seang Mei ;
Ohno-Matsui, Kyoko ;
Schmetterer, Leopold .
BRITISH JOURNAL OF OPHTHALMOLOGY, 2019, 103 (06) :855-+
[3]   Choriocapillaris changes in dry age-related macular degeneration and geographic atrophy: a review [J].
Arya, Malvika ;
Sabrosa, Almyr S. ;
Duker, Jay S. ;
Waheed, Nadia K. .
EYE AND VISION, 2018, 5
[4]   Pixel-wise segmentation of severely pathologic retinal pigment epithelium and choroidal stroma using multi-contrast Jones matrix optical coherence tomography [J].
Azuma, Shinnosuke ;
Makita, Shuichi ;
Miyazawa, Arata ;
Ikuno, Yasushi ;
Miura, Masahiro ;
Yasuno, Yoshiaki .
BIOMEDICAL OPTICS EXPRESS, 2018, 9 (07) :2955-2973
[5]  
Bradley Derek, 2007, Journal of Graphics Tools, V12, P13
[6]   Assessment of choroidal blood flow using laser speckle flowgraphy [J].
Calzetti, Giacomo ;
Fondi, Klemens ;
Bata, Ahmed M. ;
Luft, Nikolaus ;
Wozniak, Piotr A. ;
Witkowska, Katarzyna J. ;
Bolz, Matthias ;
Popa-Cherecheanu, Alina ;
Werkmeister, Rene M. ;
Schmidl, Doreen ;
Garhoefer, Gerhard ;
Schmetterer, Leopold .
BRITISH JOURNAL OF OPHTHALMOLOGY, 2018, 102 (12) :1679-1683
[7]   Review of methods and applications of attenuation coefficient measurements with optical coherence tomography [J].
Chang, Shuang ;
Bowden, Audrey K. .
JOURNAL OF BIOMEDICAL OPTICS, 2019, 24 (09)
[8]   Contemporary retinal imaging techniques in diabetic retinopathy: a review [J].
Cole, Emily Dawn ;
Novais, Eduardo Amorim ;
Louzada, Ricardo Noguera ;
Waheed, Nadia K. .
CLINICAL AND EXPERIMENTAL OPHTHALMOLOGY, 2016, 44 (04) :289-299
[9]   Region filling and object removal by exemplar-based image inpainting [J].
Criminisi, A ;
Pérez, P ;
Toyama, K .
IEEE TRANSACTIONS ON IMAGE PROCESSING, 2004, 13 (09) :1200-1212
[10]   Impact of ocular magnification on retinal and choriocapillaris blood flow quantification in myopia with swept-source optical coherence tomography angiography [J].
Dai, Yining ;
Xin, Chen ;
Zhang, Qinqin ;
Chu, Zhongdi ;
Zhou, Hao ;
Zhou, Xiao ;
Qiao, Liya ;
Wang, Ruikang K. .
QUANTITATIVE IMAGING IN MEDICINE AND SURGERY, 2021, 11 (03) :948-956