Integrating high-throughput technologies in the quest for effective biomarkers for ovarian cancer

被引:121
作者
Kulasingam, Vathany [1 ,2 ]
Pavlou, Maria P. [1 ,2 ]
Diamandis, Eleftherios P. [1 ,2 ,3 ]
机构
[1] Univ Toronto, Dept Lab Med & Pathobiol, Toronto, ON M5G 1X5, Canada
[2] Mt Sinai Hosp, Dept Pathol & Lab Med, Toronto, ON M5G 1X5, Canada
[3] Univ Hlth Network, Dept Clin Biochem, Toronto, ON M5G 2C4, Canada
关键词
GRANULIN-EPITHELIN PRECURSOR; PROTEOMIC ANALYSIS; BREAST-CANCER; MASS-SPECTROMETRY; GROWTH-FACTOR; MALIGNANT ASCITES; SERUM; DISCOVERY; PROTEIN; PLASMA;
D O I
10.1038/nrc2831
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Despite widespread interest, few serum biomarkers have been introduced to the clinic over the past 20 years. Each approach to ovarian cancer biomarker discovery has its own advantages and disadvantages and it seems likely that a global biomarker discovery platform that mines all possible sources for biomarkers might be more useful. such data could be combined with information from relevant microarray data, bioinformatic analyses and literature searches. This proposed integrated systems biology approach has the potential to yield promising ovarian cancer markers for diagnosis, prognosis and monitoring of patients during therapy.
引用
收藏
页码:371 / 378
页数:9
相关论文
共 60 条
[1]   Malignant ascites: Past, present, and future [J].
Adam, RA ;
Adam, YG .
JOURNAL OF THE AMERICAN COLLEGE OF SURGEONS, 2004, 198 (06) :999-1011
[2]   Multi-site assessment of the precision and reproducibility of multiple reaction monitoring-based measurements of proteins in plasma [J].
Addona, Terri A. ;
Abbatiello, Susan E. ;
Schilling, Birgit ;
Skates, Steven J. ;
Mani, D. R. ;
Bunk, David M. ;
Spiegelman, Clifford H. ;
Zimmerman, Lisa J. ;
Ham, Amy-Joan L. ;
Keshishian, Hasmik ;
Hall, Steven C. ;
Allen, Simon ;
Blackman, Ronald K. ;
Borchers, Christoph H. ;
Buck, Charles ;
Cardasis, Helene L. ;
Cusack, Michael P. ;
Dodder, Nathan G. ;
Gibson, Bradford W. ;
Held, Jason M. ;
Hiltke, Tara ;
Jackson, Angela ;
Johansen, Eric B. ;
Kinsinger, Christopher R. ;
Li, Jing ;
Mesri, Mehdi ;
Neubert, Thomas A. ;
Niles, Richard K. ;
Pulsipher, Trenton C. ;
Ransohoff, David ;
Rodriguez, Henry ;
Rudnick, Paul A. ;
Smith, Derek ;
Tabb, David L. ;
Tegeler, Tony J. ;
Variyath, Asokan M. ;
Vega-Montoto, Lorenzo J. ;
Wahlander, Asa ;
Waldemarson, Sofia ;
Wang, Mu ;
Whiteaker, Jeffrey R. ;
Zhao, Lei ;
Anderson, N. Leigh ;
Fisher, Susan J. ;
Liebler, Daniel C. ;
Paulovich, Amanda G. ;
Regnier, Fred E. ;
Tempst, Paul ;
Carr, Steven A. .
NATURE BIOTECHNOLOGY, 2009, 27 (07) :633-U85
[3]   The human plasma proteome - History, character, and diagnostic prospects [J].
Anderson, NL ;
Anderson, NG .
MOLECULAR & CELLULAR PROTEOMICS, 2002, 1 (11) :845-867
[4]   Influences of blood sample processing on low-molecular-weight proteome identified by surface-enhanced laser desorption/ionization mass spectrometry [J].
Banks, RE ;
Stanley, AJ ;
Cairns, DA ;
Barrett, JH ;
Clarke, P ;
Thompson, D ;
Selby, PJ .
CLINICAL CHEMISTRY, 2005, 51 (09) :1637-1649
[5]   Large-scale proteomics analysis of human ovarian cancer for biomarkers [J].
Bengtsson, Sofia ;
Krogh, Morten ;
Szigyarto, Cristina Al-Khalili ;
Uhlen, Mathias ;
Schedvins, Kjell ;
Silfversward, Claes ;
Linder, Stig ;
Auer, Gert ;
Alaiya, Ayodele ;
James, Peter .
JOURNAL OF PROTEOME RESEARCH, 2007, 6 (04) :1440-1450
[6]   Differential gene expression profiles between tumor biopsies and short-term primary cultures of ovarian serous carcinomas: Identification of novel molecular biomarkers for early diagnosis and therapy [J].
Bignotti, Eliana ;
Tassi, Renata A. ;
Calza, Stefano ;
Ravaggi, Antonella ;
Romani, Chiara ;
Rossi, Elisa ;
Falchetti, Marcella ;
Odicino, Franco E. ;
Pecorelli, Sergio ;
Santin, Alessandro D. .
GYNECOLOGIC ONCOLOGY, 2006, 103 (02) :405-416
[7]   Cancer of the ovary [J].
Cannistra, SA .
NEW ENGLAND JOURNAL OF MEDICINE, 2004, 351 (24) :2519-2529
[8]  
Chang HW, 2002, JNCI-J NATL CANCER I, V94, P1697
[9]   Granulin-epithelin precursor is a novel prognostic marker in epithelial ovarian carcinoma [J].
Davidson, B ;
Alejandro, E ;
Florenes, VA ;
Goderstad, JM ;
Risberg, B ;
Kristensen, GB ;
Trope, CG ;
Kohn, EC .
CANCER, 2004, 100 (10) :2139-2147
[10]   Protein Quantification by Mass Spectrometry: Is It Ready for Prime Time? [J].
Diamandis, Eleftherios P. .
CLINICAL CHEMISTRY, 2009, 55 (07) :1427-1430