Evaluation of CYP2C19 Gene Polymorphisms in Patients with Acid Peptic Disorders Treated with Esomeprazole

被引:4
作者
Diaz-Ordonez, Lorena [1 ,2 ,3 ]
Ramirez-Montano, Diana [1 ,2 ,3 ]
Candelo, Estephania [2 ,3 ,4 ]
Gonzalez-Restrepo, Carolina [1 ]
Silva-Pena, Sebastian [1 ]
Arturo Rojas, Carlos [5 ]
Sepulveda Copete, Mario [5 ]
Raul Echavarria, Hector [6 ]
Pachajoa, Harry [1 ,2 ,3 ]
机构
[1] Univ Icesi, Fac Hlth Sci, Basic Med Sci Dept, Cali, Colombia
[2] Fdn Valle Lili, Clin Genet Dept, Cali, Colombia
[3] Univ Icesi, Res Ctr Rare Dis & Congenital Abnormal CIACER, Cali, Colombia
[4] Fdn Valle Lili, Res Ctr, Cali, Colombia
[5] Fdn Valle Lili, Gastroenterol Dept, Cali, Colombia
[6] Ctr Med Imbanaco, Cali, Colombia
关键词
single nucleotide polymorphism; cytochrome P450 CYP2C19; pharmacogenetics; computational biology; treatment failure; proton pump inhibitors; CYTOCHROME-P450; ALLELE; CYP2C19-ASTERISK-17; PHARMACOGENETICS; INFORMATION; VARIABILITY; POPULATION; METABOLISM; FREQUENCY;
D O I
10.2147/PGPM.S285144
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
Background: CYP2C19 is a highly polymorphic gene that encodes an enzyme with the same name and whose function is associated with the metabolism of many important drugs, such as proton pump inhibitors (such as esomeprazole, which is used for the treatment of acid peptic disease). Genetic variants in CYP2C19 alter protein function and affect drug metabolism. This study aims to genotypically and phenotypically characterize the genetic variants in the CYP2C19 gene in 12 patients with acid peptic disorders and different therapeutic profiles to proton pump inhibitor (PPI) drugs. The patients were randomly selected from a controlled, randomized and blinded clinical pilot trial of 33 patients. We determined the presence and frequency of single nucleotide polymorphisms (SNPs) within exons 1-5 and 9, the intron-exon junctions, and a fragment in the 3' UTR region of the CYP2C19 gene using Sanger sequencing. Undescribed polymorphisms were analyzed by free online bioinformatics tools to evaluate the potential molecular effects of these genetic variants. Results: We identified nine polymorphisms, six of which had no reported functions. One of these genetic variants, with a functional impact, not yet reported (p.Arg132Trp) was predicted by bioinformatic tools as potentially pathogenic. This finding suggests that p.Arg132Trp could be related to poor metabolizers of drugs metabolized by CYP2C19. Conclusion: We identified the genotype spectrum of variants in CYP2C19. The genotype spectrum of variants in CYP2C19 could predict the treatment response and could support to evaluate clinical efficacy in patients treated with esomeprazole.
引用
收藏
页码:509 / 520
页数:12
相关论文
共 48 条
[1]   CYP2C19 Genetic Polymorphism in Saudi Arabians [J].
Al-Jenoobi, Fahad I. ;
Alkharfy, Khalid M. ;
Alghamdi, Amal M. ;
Bagulb, Khawla M. ;
Al-Mohizea, Abdullah M. ;
Al-Muhsen, Saleh ;
Halwani, Rabih ;
Parvez, Mohammad Khalid ;
Al-Dosari, Mohammed S. .
BASIC & CLINICAL PHARMACOLOGY & TOXICOLOGY, 2013, 112 (01) :50-54
[2]   PharmGKB summary: very important pharmacogene information for cytochrome P450, family 2, subfamily C, polypeptide 8 [J].
Aquilante, Christina L. ;
Niemi, Mikko ;
Gong, Li ;
Altman, Russ B. ;
Klein, Teri E. .
PHARMACOGENETICS AND GENOMICS, 2013, 23 (12) :721-728
[3]   Patterns of linkage disequilibrium in the human genome [J].
Ardlie, KG ;
Kruglyak, L ;
Seielstad, M .
NATURE REVIEWS GENETICS, 2002, 3 (04) :299-309
[4]  
Bennadi Darshana, 2013, J Basic Clin Pharm, V5, P19, DOI 10.4103/0976-0105.128253
[5]   MicroRNAs Mediated Regulation of Expression of Nucleoside Analog Pathway Genes in Acute Myeloid Leukemia [J].
Bhise, Neha S. ;
Elsayed, Abdelrahman H. ;
Cao, Xueyuan ;
Pounds, Stanley ;
Lamba, Jatinder K. .
GENES, 2019, 10 (04)
[6]   Chapter 11: Genome-Wide Association Studies [J].
Bush, William S. ;
Moore, Jason H. .
PLOS COMPUTATIONAL BIOLOGY, 2012, 8 (12)
[7]  
Cardona-Ospina Jaime A, 2016, Rev. colomb. Gastroenterol., V31, P403
[8]   From pharmacokinetics to pharmacogenomics: A new approach to tailor immunosuppressive therapy [J].
Cattaneo, D ;
Perico, N ;
Remuzzi, G .
AMERICAN JOURNAL OF TRANSPLANTATION, 2004, 4 (03) :299-310
[9]   The CYP2C19 Intron 2 Branch Point SNP is the Ancestral Polymorphism Contributing to the Poor Metabolizer Phenotype in Livers with CYP2C19☆35 and CYP2C19☆2 Alleles [J].
Chaudhry, Amarjit S. ;
Prasad, Bhagwat ;
Shirasaka, Yoshiyuki ;
Fohner, Alison ;
Finkelstein, David ;
Fan, Yiping ;
Wang, Shuoguo ;
Wu, Gang ;
Aklillu, Eleni ;
Sim, Sarah C. ;
Thummel, Kenneth E. ;
Schuetz, Erin G. .
DRUG METABOLISM AND DISPOSITION, 2015, 43 (08) :1226-1235
[10]  
CLM, IGSR POP