An Analytical Review of Computational Drug Repurposing

被引:29
作者
Sadeghi, Seyedeh Shaghayegh [1 ]
Keyvanpour, Mohammad Reza [1 ]
机构
[1] Alzahra Univ, Dept Comp Engn, Data Min Lab, Tehran, Iran
关键词
Drugs; Diseases; Computational modeling; Bioinformatics; Immune system; Chemicals; Drug repurposing; machine learning; network analysis; relation extraction; LINK PREDICTION; SOCIAL NETWORK; DATABASE; INFORMATION; DISCOVERY; ARRAYEXPRESS; INTEGRATION; RESISTANCE;
D O I
10.1109/TCBB.2019.2933825
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Drug repurposing is a vital function in pharmaceutical fields and has gained popularity in recent years in both the pharmaceutical industry and research community. It refers to the process of discovering new uses and indications for existing or failed drugs. It is cost-effective and reliable in contrast to experimental drug discovery, which is a costly, time-consuming, and risky process and limited to a relatively small number of targets. Accordingly, a plethora of computational methodologies have been propounded to repurpose drugs on a large scale by utilizing available high throughput data. The available literature, however, lacks a contemporary and comprehensive analysis of the current computational drug repurposing methodologies. In this paper, we presented a systematic analysis of computational drug repurposing which consists of three main sections: Initially, we categorize the computational drug repurposing methods based on their technical approach and artificial intelligence perspective and discuss the strengths and weaknesses of various methods. Secondly, some general criteria are recommended to analyze our proposed categorization. In the third and final section, a qualitative comparison is made between each approach which is a guide to understanding their preference to one another. Further, this systematic analysis can help in the efficient selection and improvement of drug repurposing techniques based on the nature of computational methods implemented on biological resources.
引用
收藏
页码:472 / 488
页数:17
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