Assessing Discriminative Performance at External Validation of Clinical Prediction Models
被引:29
作者:
Nieboer, Daan
论文数: 0引用数: 0
h-index: 0
机构:
Erasmus MC Univ Med Ctr, Dept Publ Hlth, Rotterdam, NetherlandsErasmus MC Univ Med Ctr, Dept Publ Hlth, Rotterdam, Netherlands
Nieboer, Daan
[1
]
van der Ploeg, Tjeerd
论文数: 0引用数: 0
h-index: 0
机构:
Inholland Univ, Med Ctr Alkmaar, Dept Sci, Alkmaar, NetherlandsErasmus MC Univ Med Ctr, Dept Publ Hlth, Rotterdam, Netherlands
van der Ploeg, Tjeerd
[2
]
Steyerberg, Ewout W.
论文数: 0引用数: 0
h-index: 0
机构:
Erasmus MC Univ Med Ctr, Dept Publ Hlth, Rotterdam, NetherlandsErasmus MC Univ Med Ctr, Dept Publ Hlth, Rotterdam, Netherlands
Steyerberg, Ewout W.
[1
]
机构:
[1] Erasmus MC Univ Med Ctr, Dept Publ Hlth, Rotterdam, Netherlands
[2] Inholland Univ, Med Ctr Alkmaar, Dept Sci, Alkmaar, Netherlands
来源:
PLOS ONE
|
2016年
/
11卷
/
02期
关键词:
TRAUMATIC BRAIN-INJURY;
IMPACT;
FRAMEWORK;
D O I:
10.1371/journal.pone.0148820
中图分类号:
O [数理科学和化学];
P [天文学、地球科学];
Q [生物科学];
N [自然科学总论];
学科分类号:
07 ;
0710 ;
09 ;
摘要:
Introduction External validation studies are essential to study the generalizability of prediction models. Recently a permutation test, focusing on discrimination as quantified by the c-statistic, was proposed to judge whether a prediction model is transportable to a new setting. We aimed to evaluate this test and compare it to previously proposed procedures to judge any changes in c-statistic from development to external validation setting. Methods We compared the use of the permutation test to the use of benchmark values of the c-statistic following from a previously proposed framework to judge transportability of a prediction model. In a simulation study we developed a prediction model with logistic regression on a development set and validated them in the validation set. We concentrated on two scenarios: 1) the case-mix was more heterogeneous and predictor effects were weaker in the validation set compared to the development set, and 2) the case-mix was less heterogeneous in the validation set and predictor effects were identical in the validation and development set. Furthermore we illustrated the methods in a case study using 15 datasets of patients suffering from traumatic brain injury. Results The permutation test indicated that the validation and development set were homogenous in scenario 1 (in almost all simulated samples) and heterogeneous in scenario 2 (in 17%-39% of simulated samples). Previously proposed benchmark values of the c-statistic and the standard deviation of the linear predictors correctly pointed at the more heterogeneous case-mix in scenario 1 and the less heterogeneous case-mix in scenario 2. Conclusion The recently proposed permutation test may provide misleading results when externally validating prediction models in the presence of case-mix differences between the development and validation population. To correctly interpret the c-statistic found at external validation it is crucial to disentangle case-mix differences from incorrect regression coefficients.
机构:
Univ Med Ctr Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, NetherlandsUniv Med Ctr Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Debray, Thomas P. A.
Vergouwe, Yvonne
论文数: 0引用数: 0
h-index: 0
机构:
Erasmus MC, Dept Publ Hlth, Rotterdam, NetherlandsUniv Med Ctr Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Vergouwe, Yvonne
Koffijberg, Hendrik
论文数: 0引用数: 0
h-index: 0
机构:
Univ Med Ctr Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, NetherlandsUniv Med Ctr Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Koffijberg, Hendrik
Nieboer, Daan
论文数: 0引用数: 0
h-index: 0
机构:
Erasmus MC, Dept Publ Hlth, Rotterdam, NetherlandsUniv Med Ctr Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Nieboer, Daan
Steyerberg, Ewout W.
论文数: 0引用数: 0
h-index: 0
机构:
Erasmus MC, Dept Publ Hlth, Rotterdam, NetherlandsUniv Med Ctr Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Steyerberg, Ewout W.
Moons, Karel G. M.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Med Ctr Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, NetherlandsUniv Med Ctr Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
机构:
UMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, NetherlandsUMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Moons, Karel G. M.
Kengne, Andre Pascal
论文数: 0引用数: 0
h-index: 0
机构:
UMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Univ Sydney, George Inst Global Hlth, Div Cardiovasc, Sydney, NSW 2006, Australia
S African MRC, NCRP Cardiovasc & Metab Dis, Cape Town, South Africa
Univ Cape Town, ZA-7925 Cape Town, South AfricaUMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Kengne, Andre Pascal
Grobbee, Diederick E.
论文数: 0引用数: 0
h-index: 0
机构:
UMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, NetherlandsUMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Grobbee, Diederick E.
Royston, Patrick
论文数: 0引用数: 0
h-index: 0
机构:
MRC Clin Trials Unit, London, EnglandUMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Royston, Patrick
Vergouwe, Yvonne
论文数: 0引用数: 0
h-index: 0
机构:
UMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, NetherlandsUMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Vergouwe, Yvonne
Altman, Douglas G.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Oxford, Ctr Stat Med, Oxford, EnglandUMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Altman, Douglas G.
Woodward, Mark
论文数: 0引用数: 0
h-index: 0
机构:
Univ Sydney, George Inst Global Hlth, Div Cardiovasc, Sydney, NSW 2006, Australia
Johns Hopkins Univ, Dept Epidemiol, Baltimore, MD USAUMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
机构:
Univ Med Ctr Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, NetherlandsUniv Med Ctr Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Debray, Thomas P. A.
Vergouwe, Yvonne
论文数: 0引用数: 0
h-index: 0
机构:
Erasmus MC, Dept Publ Hlth, Rotterdam, NetherlandsUniv Med Ctr Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Vergouwe, Yvonne
Koffijberg, Hendrik
论文数: 0引用数: 0
h-index: 0
机构:
Univ Med Ctr Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, NetherlandsUniv Med Ctr Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Koffijberg, Hendrik
Nieboer, Daan
论文数: 0引用数: 0
h-index: 0
机构:
Erasmus MC, Dept Publ Hlth, Rotterdam, NetherlandsUniv Med Ctr Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Nieboer, Daan
Steyerberg, Ewout W.
论文数: 0引用数: 0
h-index: 0
机构:
Erasmus MC, Dept Publ Hlth, Rotterdam, NetherlandsUniv Med Ctr Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Steyerberg, Ewout W.
Moons, Karel G. M.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Med Ctr Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, NetherlandsUniv Med Ctr Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
机构:
UMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, NetherlandsUMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Moons, Karel G. M.
Kengne, Andre Pascal
论文数: 0引用数: 0
h-index: 0
机构:
UMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Univ Sydney, George Inst Global Hlth, Div Cardiovasc, Sydney, NSW 2006, Australia
S African MRC, NCRP Cardiovasc & Metab Dis, Cape Town, South Africa
Univ Cape Town, ZA-7925 Cape Town, South AfricaUMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Kengne, Andre Pascal
Grobbee, Diederick E.
论文数: 0引用数: 0
h-index: 0
机构:
UMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, NetherlandsUMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Grobbee, Diederick E.
Royston, Patrick
论文数: 0引用数: 0
h-index: 0
机构:
MRC Clin Trials Unit, London, EnglandUMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Royston, Patrick
Vergouwe, Yvonne
论文数: 0引用数: 0
h-index: 0
机构:
UMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, NetherlandsUMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Vergouwe, Yvonne
Altman, Douglas G.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Oxford, Ctr Stat Med, Oxford, EnglandUMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands
Altman, Douglas G.
Woodward, Mark
论文数: 0引用数: 0
h-index: 0
机构:
Univ Sydney, George Inst Global Hlth, Div Cardiovasc, Sydney, NSW 2006, Australia
Johns Hopkins Univ, Dept Epidemiol, Baltimore, MD USAUMC Utrecht, Julius Ctr Hlth Sci & Primary Care, NL-3508 GA Utrecht, Netherlands