Composition and evolutionary importance of transposable elements in humans and primates

被引:9
作者
Lee, Hee-Eun [1 ]
Eo, Jungwoo [1 ]
Kim, Heui-Soo [1 ]
机构
[1] Pusan Natl Univ, Dept Biol Sci, Coll Nat Sci, Pusan 609735, South Korea
关键词
Transposable elements; Humans; Primates; Evolution; Disease; DNA METHYLATION; GENOME; RETROTRANSPOSONS; CHIMPANZEE; EXPRESSION; IMPACT; GENE;
D O I
10.1007/s13258-014-0249-y
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Transposable elements (TEs) have skill of altering the position inside the genome and these TEs are widespread in both of plants and animals. They are separated into class I called retrotransposons, and class II called DNA transposons. According to the previous studies, not only TEs are related with disease, they are key factor of human and primate evolution. From this review, we discussed about the impact of transposable element, its role in the genome of human and primates and how TE distribution is differ from them. Additionally, we described how TEs contributed on primate evolution by its unique role. This review could be great use for further studies in relation to evolution mechanism and various diseases.
引用
收藏
页码:135 / 140
页数:6
相关论文
共 53 条
[1]  
Ayarpadikannan Selvam, 2014, Genomics & Informatics, V12, P98, DOI 10.5808/GI.2014.12.3.98
[2]   Evolution of microRNA diversity and regulation in animals [J].
Berezikov, Eugene .
NATURE REVIEWS GENETICS, 2011, 12 (12) :846-860
[3]   Alternative splicing and genome complexity [J].
Brett, D ;
Pospisil, H ;
Valcárcel, J ;
Reich, J ;
Bork, P .
NATURE GENETICS, 2002, 30 (01) :29-30
[4]  
Callinan P, 2006, GENOME DYN, V1, P104, DOI 10.1159/000092503
[5]   Gibbon genome and the fast karyotype evolution of small apes [J].
Carbone, Lucia ;
Harris, R. Alan ;
Gnerre, Sante ;
Veeramah, Krishna R. ;
Lorente-Galdos, Belen ;
Huddleston, John ;
Meyer, Thomas J. ;
Herrero, Javier ;
Roos, Christian ;
Aken, Bronwen ;
Anaclerio, Fabio ;
Archidiacono, Nicoletta ;
Baker, Carl ;
Barre, Daniel ;
Batzer, Marka. ;
Beal, Kathryn ;
Blancher, Antoine ;
Bohrson, Craig L. ;
Brameier, Markus ;
Campbell, Michael S. ;
Capozzi, Oronzo ;
Casola, Claudio ;
Chiatante, Giorgia ;
Cree, Andrew ;
Damert, Annette ;
de Jong, Pieter J. ;
Dumas, Laura ;
Fernandez-Callejo, Marcos ;
Flicek, Paul ;
Fuchs, Nina V. ;
Gue, Ivo ;
Gut, Marta ;
Hahn, Matthew W. ;
Hernandez-Rodriguez, Jessica ;
Hillier, LaDeana W. ;
Hubley, Robert ;
Ianc, Bianca ;
Izsvak, Zsuzsanna ;
Jablonski, Nina G. ;
Johnstone, Laurel M. ;
Karimpour-Fard, Anis ;
Konkel, Miriam K. ;
Kostka, Dennis ;
Lazar, Nathan H. ;
Lee, Sandra L. ;
Lewis, Lora R. ;
Liu, Yue ;
Locke, Devin P. ;
Mallick, Swapan ;
Mendez, Fernando L. .
NATURE, 2014, 513 (7517) :195-+
[6]   Centromere Remodeling in Hoolock leuconedys (Hylobatidae) by a New Transposable Element Unique to the Gibbons [J].
Carbone, Lucia ;
Harris, R. Alan ;
Mootnick, Alan R. ;
Milosavljevic, Aleksandar ;
Martin, David I. K. ;
Rocchi, Mariano ;
Capozzi, Oronzo ;
Archidiacono, Nicoletta ;
Konkel, Miriam K. ;
Walker, Jerilyn A. ;
Batzer, Mark A. ;
de Jong, Pieter J. .
GENOME BIOLOGY AND EVOLUTION, 2012, 4 (07) :760-770
[7]  
Chen Lu, 2012, Int J Evol Biol, V2012, P596274, DOI 10.1155/2012/596274
[8]   The impact of retrotransposons on human genome evolution [J].
Cordaux, Richard ;
Batzer, Mark A. .
NATURE REVIEWS GENETICS, 2009, 10 (10) :691-703
[9]   Differences in DNA Methylation Patterns and Expression of the CCRK Gene in Human and Nonhuman Primate Cortices [J].
Farcas, Ruxandra ;
Schneider, Eberhard ;
Frauenknecht, Katrin ;
Kondova, Ivanela ;
Bontrop, Ronald ;
Bohl, Juergen ;
Navarro, Bianca ;
Metzler, Markus ;
Zischler, Hans ;
Zechner, Ulrich ;
Daser, Angelika ;
Haaf, Thomas .
MOLECULAR BIOLOGY AND EVOLUTION, 2009, 26 (06) :1379-1389
[10]   Evolutionary and biomedical insights from the rhesus macaque genome [J].
Gibbs, Richard A. ;
Rogers, Jeffrey ;
Katze, Michael G. ;
Bumgarner, Roger ;
Weinstock, George M. ;
Mardis, Elaine R. ;
Remington, Karin A. ;
Strausberg, Robert L. ;
Venter, J. Craig ;
Wilson, Richard K. ;
Batzer, Mark A. ;
Bustamante, Carlos D. ;
Eichler, Evan E. ;
Hahn, Matthew W. ;
Hardison, Ross C. ;
Makova, Kateryna D. ;
Miller, Webb ;
Milosavljevic, Aleksandar ;
Palermo, Robert E. ;
Siepel, Adam ;
Sikela, James M. ;
Attaway, Tony ;
Bell, Stephanie ;
Bernard, Kelly E. ;
Buhay, Christian J. ;
Chandrabose, Mimi N. ;
Dao, Marvin ;
Davis, Clay ;
Delehaunty, Kimberly D. ;
Ding, Yan ;
Dinh, Huyen H. ;
Dugan-Rocha, Shannon ;
Fulton, Lucinda A. ;
Gabisi, Ramatu Ayiesha ;
Garner, Toni T. ;
Godfrey, Jennifer ;
Hawes, Alicia C. ;
Hernandez, Judith ;
Hines, Sandra ;
Holder, Michael ;
Hume, Jennifer ;
Jhangiani, Shalini N. ;
Joshi, Vandita ;
Khan, Ziad Mohid ;
Kirkness, Ewen F. ;
Cree, Andrew ;
Fowler, R. Gerald ;
Lee, Sandra ;
Lewis, Lora R. ;
Li, Zhangwan .
SCIENCE, 2007, 316 (5822) :222-234