Chemo-biological mRNA imaging with single nucleotide specificity

被引:13
作者
Knoll, Andrea [1 ]
Kankowski, Svenja [2 ]
Schoellkopf, Sophie [1 ]
Meier, Jochen C. [2 ]
Seitz, Oliver [1 ]
机构
[1] Humboldt Univ, Dept Chem, Brook Taylor Str 2, D-12489 Berlin, Germany
[2] Tech Univ Carolo Wilhelmina Braunschweig, Zool Inst, Spielmannstr 7, D-38106 Braunschweig, Germany
关键词
PEPTIDE NUCLEIC-ACIDS; FIT-PROBES; THIAZOLE ORANGE; FLUORESCENT BASE; LIVING CELLS; CANCER-CELLS; HYBRIDIZATION; BRIGHTNESS; EXPRESSION; MARKER;
D O I
10.1039/c9cc06989e
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Unambiguous imaging of C -> U edited mRNA calls for a method that distinguishes a locally high concentration of unbound probe or single nucleotide mismatched target from a locally low concentration of matched mRNA target. To address this issue, we combine FIT probes as a "chemical" detection system with the "biological" MS2 technique. Ratio measurements provide a convenient parameter to discriminate the edited from the unedited state of mRNA encoding for GlyR alpha 2 in HEK cells.
引用
收藏
页码:14817 / 14820
页数:4
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