Multiple-time scale accelerated molecular dynamics: Addressing the small-barrier problem

被引:71
作者
Miron, RA [1 ]
Fichthorn, KA
机构
[1] Penn State Univ, Dept Phys, University Pk, PA 16802 USA
[2] Penn State Univ, Dept Chem Engn, University Pk, PA 16802 USA
基金
美国国家科学基金会;
关键词
D O I
10.1103/PhysRevLett.93.128301
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
We present a method for accelerated molecular-dynamics simulation in systems with rare-event dynamics that span a wide range of time scales. Using a variant of hyperdynamics, we detect, on the fly, groups of recurrent states connected by small energy barriers and we modify the potential-energy surface locally to consolidate them into large, coarse states. In this way, fast motion between recurrent states is treated within an equilibrium formalism and dynamics can be simulated over the longer time scale of the slow events. We apply the method to simulate cluster diffusion and the initial growth of Co on Cu(001),where time scales spanning more than 6 orders of magnitude are present, and show that the method correctly follows the slow events, so that much larger times can be simulated than with accelerated molecular dynamics alone.
引用
收藏
页码:128301 / 1
页数:4
相关论文
共 18 条
[1]   Island-size distributions in submonolayer epitaxial growth: Influence of the mobility of small clusters [J].
Bartelt, MC ;
Gunther, S ;
Kopatzki, E ;
Behm, RJ ;
Evans, JW .
PHYSICAL REVIEW B, 1996, 53 (07) :4099-4104
[2]   Models for diffusion and island growth in metal monolayers [J].
Biham, O ;
Furman, I ;
Karimi, M ;
Vidali, G ;
Kennett, R ;
Zeng, H .
SURFACE SCIENCE, 1998, 400 (1-3) :29-43
[3]  
Cinlar E, 2013, INTRO STOCHASTIC PRO
[4]   A climbing image nudged elastic band method for finding saddle points and minimum energy paths [J].
Henkelman, G ;
Uberuaga, BP ;
Jónsson, H .
JOURNAL OF CHEMICAL PHYSICS, 2000, 113 (22) :9901-9904
[5]   Energetics of Co adatoms on the Cu(001) surface [J].
Levanov, NA ;
Stepanyuk, VS ;
Hergert, W ;
Bazhanov, DI ;
Dederichs, PH ;
Katsnelson, A ;
Massobrio, C .
PHYSICAL REVIEW B, 2000, 61 (03) :2230-2234
[6]   EFFECT OF SMALL-CLUSTER MOBILITY AND DISSOCIATION ON THE ISLAND DENSITY IN EPITAXIAL-GROWTH [J].
LIU, SD ;
BONIG, L ;
METIU, H .
PHYSICAL REVIEW B, 1995, 52 (04) :2907-2913
[7]   Accelerated molecular dynamics with the bond-boost method [J].
Miron, RA ;
Fichthorn, KA .
JOURNAL OF CHEMICAL PHYSICS, 2003, 119 (12) :6210-6216
[8]   The Step and Slide method for finding saddle points on multidimensional potential surfaces [J].
Miron, RA ;
Fichthorn, KA .
JOURNAL OF CHEMICAL PHYSICS, 2001, 115 (19) :8742-8747
[9]   Exploiting past visits or minimum-barrier knowledge to gain further boost in the temperature-accelerated dynamics method [J].
Montalenti, F ;
Voter, AF .
JOURNAL OF CHEMICAL PHYSICS, 2002, 116 (12) :4819-4828
[10]   Atomic exchange processes and bimodal initial growth of Co/Cu(001) [J].
Nouvertné, F ;
May, U ;
Bamming, M ;
Rampe, A ;
Korte, U ;
Güntherodt, G ;
Pentcheva, R ;
Scheffler, M .
PHYSICAL REVIEW B, 1999, 60 (20) :14382-14386