Deactivation of the GATA Transcription Factor ELT-2 Is a Major Driver of Normal Aging in C. elegans

被引:36
作者
Mann, Frederick G. [1 ,2 ]
Van Nostrand, Eric L. [3 ]
Friedland, Ari E. [4 ]
Liu, Xiao [5 ]
Kim, Stuart K. [1 ,2 ]
机构
[1] Stanford Univ, Med Ctr, Dept Genet, Stanford, CA 94305 USA
[2] Stanford Univ, Med Ctr, Dept Dev Biol, Stanford, CA 94305 USA
[3] Univ Calif San Diego, Inst Genom Med, Dept Cellular & Mol Med, La Jolla, CA 92093 USA
[4] Editas Med, Cambridge, MA USA
[5] Tsinghua Univ, Sch Life Sci, Beijing 100084, Peoples R China
来源
PLOS GENETICS | 2016年 / 12卷 / 04期
关键词
CAENORHABDITIS-ELEGANS; INTEGRATIVE ANALYSIS; EXPRESSION PROFILES; GENE-EXPRESSION; CELL FATE; LONGEVITY; BACTERIAL; INTESTINE; GENOME; RESTRICTION;
D O I
10.1371/journal.pgen.1005956
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
To understand the molecular processes underlying aging, we screened modENCODE ChIP-seq data to identify transcription factors that bind to age-regulated genes in C. elegans. The most significant hit was the GATA transcription factor encoded by elt-2, which is responsible for inducing expression of intestinal genes during embryogenesis. Expression of ELT-2 decreases during aging, beginning in middle age. We identified genes regulated by ELT-2 in the intestine during embryogenesis, and then showed that these developmental genes markedly decrease in expression as worms grow old. Overexpression of elt-2 extends lifespan and slows the rate of gene expression changes that occur during normal aging. Thus, our results identify the developmental regulator ELT-2 as a major driver of normal aging in C. elegans.
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页数:26
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共 54 条
  • [1] Clearance of p16Ink4a-positive senescent cells delays ageing-associated disorders
    Baker, Darren J.
    Wijshake, Tobias
    Tchkonia, Tamar
    LeBrasseur, Nathan K.
    Childs, Bennett G.
    van de Sluis, Bart
    Kirkland, James L.
    van Deursen, Jan M.
    [J]. NATURE, 2011, 479 (7372) : 232 - U112
  • [2] Composition and dynamics of the Caenorhabditis elegans early embryonic transcriptome
    Baugh, LR
    Hill, AA
    Slonim, DK
    Brown, EL
    Hunter, CP
    [J]. DEVELOPMENT, 2003, 130 (05): : 889 - 900
  • [3] 3′-End Sequencing for Expression Quantification (3SEQ) from Archival Tumor Samples
    Beck, Andrew H.
    Weng, Ziming
    Witten, Daniela M.
    Zhu, Shirley
    Foley, Joseph W.
    Lacroute, Phil
    Smith, Cheryl L.
    Tibshirani, Robert
    van de Rijn, Matt
    Sidow, Arend
    West, Robert B.
    [J]. PLOS ONE, 2010, 5 (01):
  • [4] The Developmental Intestinal Regulator ELT-2 Controls p38-Dependent Immune Responses in Adult C. elegans
    Block, Dena H. S.
    Twumasi-Boateng, Kwame
    Kang, Hae Sung
    Carlisle, Jolie A.
    Hanganu, Alexandru
    Lai, Ty Yu-Jen
    Shapira, Michael
    [J]. PLOS GENETICS, 2015, 11 (05):
  • [5] Increased Wnt signaling during aging alters muscle stem cell fate and increases fibrosis
    Brack, Andrew S.
    Conboy, Michael J.
    Roy, Sudeep
    Lee, Mark
    Kuo, Calvin J.
    Keller, Charles
    Rando, Thomas A.
    [J]. SCIENCE, 2007, 317 (5839) : 807 - 810
  • [6] An elt-3/elt-5/elt-6 GATA transcription circuit guides aging in C-elegans
    Budovskaya, Yelena V.
    Wu, Kendall
    Southworth, Lucinda K.
    Jiang, Min
    Tedesco, Patricia
    Johnson, Thomas E.
    Kim, Stuart K.
    [J]. CELL, 2008, 134 (02) : 291 - 303
  • [7] MicroRNAs Both Promote and Antagonize Longevity in C-elegans
    de Lencastre, Alexandre
    Pincus, Zachary
    Zhou, Katherine
    Kato, Masaomi
    Lee, Siu Sylvia
    Slack, Frank J.
    [J]. CURRENT BIOLOGY, 2010, 20 (24) : 2159 - 2168
  • [8] Timing requirements for insulin/IGF-1 signaling in C-elegans
    Dillin, A
    Crawford, DK
    Kenyon, C
    [J]. SCIENCE, 2002, 298 (5594) : 830 - 834
  • [9] A GUT-TO-PHARYNX TAIL SWITCH IN EMBRYONIC EXPRESSION OF THE CAENORHABDITIS-ELEGANS GES-1 GENE CENTERS ON 2 GATA SEQUENCES
    EGAN, CR
    CHUNG, MA
    ALLEN, FL
    HESCHL, MFP
    VANBUSKIRK, CL
    MCGHEE, JD
    [J]. DEVELOPMENTAL BIOLOGY, 1995, 170 (02) : 397 - 419
  • [10] The GATA-factor elt-2 is essential for formation of the Caenorhabditis elegans intestine
    Fukushige, T
    Hawkins, MG
    McGhee, JD
    [J]. DEVELOPMENTAL BIOLOGY, 1998, 198 (02) : 286 - 302