Relative orientation of peptide planes in proteins is reflected in carbonyl-carbonyl chemical shift anisotropy cross-correlated spin relaxation

被引:22
作者
Skrynnikov, NR
Konrat, R
Muhandiram, DR
Kay, LE
机构
[1] Univ Toronto, Prot Engn Network Ctr Excellence, Toronto, ON M5S 1A8, Canada
[2] Univ Toronto, Dept Med Genet, Toronto, ON M5S 1A8, Canada
[3] Univ Toronto, Dept Biochem & Chem, Toronto, ON M5S 1A8, Canada
[4] Univ Innsbruck, Inst Organ Chem, A-6020 Innsbruck, Austria
关键词
D O I
10.1021/ja0000201
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Experiments for measuring chemical shift anisotropy (CSA) cross-correlated spin relaxation between pairs of carbonyl spins in (15)N,(13)C-labeled proteins based on differences in relaxation rates of double- and zero-quantum carbonyl coherences are presented. In the case where the carbonyl spins reside on successive residues, information about the intervening (phi,phi) backbone dihedral angles is obtained. A good correlation between predicted and measured cross-correlation rates is observed in experiments recorded on an SH3 domain from spectrin. Cross-correlated spin relaxation between carbonyl spins residing on two peptide planes linked via hydrogen bonding can also be measured for small proteins in concentrated samples, providing information about the relative orientation of these planes, as demonstrated for the spectrin SH3 domain.
引用
收藏
页码:7059 / 7071
页数:13
相关论文
共 76 条
[1]  
BAX A, 1994, METHOD ENZYMOL, V239, P79
[2]   H-1 and N-15 NMR assignment and solution structure of the SH3 domain of spectrin: Comparison of unrefined and refined structure sets with the crystal structure [J].
Blanco, FJ ;
Ortiz, AR ;
Serrano, L .
JOURNAL OF BIOMOLECULAR NMR, 1997, 9 (04) :347-357
[3]   Transferred cross-correlated relaxation complements transferred NOE: Structure of an IL-4R-derived peptide bound to STAT-6 [J].
Blommers, MJJ ;
Stark, W ;
Jones, CE ;
Head, D ;
Owen, CE ;
Jahnke, W .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1999, 121 (09) :1949-1953
[4]   REFOCUSING WITH CHIRPED PULSES FOR BROAD-BAND EXCITATION WITHOUT PHASE DISPERSION [J].
BOHLEN, JM ;
REY, M ;
BODENHAUSEN, G .
JOURNAL OF MAGNETIC RESONANCE, 1989, 84 (01) :191-197
[5]   SELECTIVE EXCITATION BY PULSE SHAPING COMBINED WITH PHASE MODULATION [J].
BOYD, J ;
SOFFE, N .
JOURNAL OF MAGNETIC RESONANCE, 1989, 85 (02) :406-413
[6]   Locally anisotropic internal polypeptide backbone dynamics by NMR relaxation [J].
Bremi, T ;
Bruschweiler, R .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1997, 119 (28) :6672-6673
[7]   Crystallography & NMR system:: A new software suite for macromolecular structure determination [J].
Brunger, AT ;
Adams, PD ;
Clore, GM ;
DeLano, WL ;
Gros, P ;
Grosse-Kunstleve, RW ;
Jiang, JS ;
Kuszewski, J ;
Nilges, M ;
Pannu, NS ;
Read, RJ ;
Rice, LM ;
Simonson, T ;
Warren, GL .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 :905-921
[8]   LONG-RANGE MOTIONAL RESTRICTIONS IN A MULTIDOMAIN ZINC-FINGER PROTEIN FROM ANISOTROPIC TUMBLING [J].
BRUSCHWEILER, R ;
LIAO, XB ;
WRIGHT, PE .
SCIENCE, 1995, 268 (5212) :886-889
[9]   Quantitative investigation of dipole-CSA cross-correlated relaxation by ZQ/DQ spectroscopy [J].
Brutscher, B ;
Skrynnikov, NR ;
Bremi, T ;
Brüschweiler, R ;
Ernst, RR .
JOURNAL OF MAGNETIC RESONANCE, 1998, 130 (02) :346-351
[10]  
Canet D, 1998, CONCEPT MAGNETIC RES, V10, P291, DOI 10.1002/(SICI)1099-0534(1998)10:5<291::AID-CMR2>3.3.CO