Genetic signature related to heme-hemoglobin metabolism pathway in sepsis secondary to pneumonia

被引:21
作者
Figuereido Leite, Giuseppe Gianini [1 ]
Scicluna, Brendon P. [2 ,3 ]
van Der Poll, Tom [2 ,3 ]
Salomao, Reinaldo [1 ]
机构
[1] Univ Fed Sao Paulo, Div Infect Dis, Dept Med, Hosp Sao Paulo,Escola Paulista Med, Sao Paulo, Brazil
[2] Univ Amsterdam, Ctr Expt & Mol Med, Amsterdam Univ Med Ctr, Locat Acad Med Ctr, Amsterdam, Netherlands
[3] Univ Amsterdam, Ctr Infect & Immun Amsterdam, Amsterdam Univ Med Ctr, Locat Acad Med Ctr, Amsterdam, Netherlands
基金
巴西圣保罗研究基金会;
关键词
STABILIZING PROTEIN; EXPRESSION; ALPHA; NETWORKS; DATABASE;
D O I
10.1038/s41540-019-0105-4
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Sepsis is defined as a life-threatening organ dysfunction caused by a dysregulated inflammatory response to pathogens. Bioinformatics and transcriptomics studies contribute to get a better understanding of the pathogenesis of sepsis. These studies revealed differentially expressed genes (DEGs) in sepsis involved in several pathways. Here we investigated the gene expression profiles of blood leukocytes using three microarray datasets of sepsis secondary to pneumonia, focusing on the heme/hemoglobin metabolism pathway. We demonstrate that the heme/hemoglobin metabolism pathway was found to be enriched in these three cohorts with four common genes (ALAS2, AHSP, HBD, and CA1). Several studies show that these four genes are involved in the cytoprotection of non-erythrocyte cells in response to different stress conditions. The upregulation of heme/hemoglobin metabolism in sepsis might be a protective response of white cells to the hostile environment present in septic patients (follow-up samples).
引用
收藏
页数:9
相关论文
共 49 条
[1]   Biosynthesis of heme in mammals [J].
Ajioka, Richard S. ;
Phillips, John D. ;
Kushner, James P. .
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH, 2006, 1763 (07) :723-736
[2]   Transcriptional mechanism of vascular endothelial growth factor-induced expression of protein kinase CβII in chronic lymphocytic leukaemia cells [J].
Al-Sanabra, Ola ;
Duckworth, Andrew D. ;
Glenn, Mark A. ;
Brown, Benjamin R. B. ;
Angelillo, Piera ;
Lee, Kelvin ;
Herbert, John ;
Falciani, Francesco ;
Kalakonda, Nagesh ;
Slupsky, Joseph R. .
SCIENTIFIC REPORTS, 2017, 7
[3]   An automated method for finding molecular complexes in large protein interaction networks [J].
Bader, GD ;
Hogue, CW .
BMC BIOINFORMATICS, 2003, 4 (1)
[4]   Microarray-based gene expression profiling in patients with cryopyrin-associated periodic syndromes defines a disease-related signature and IL-1-responsive transcripts [J].
Balow, James E., Jr. ;
Ryan, John G. ;
Chae, Jae Jin ;
Booty, Matthew G. ;
Bulua, Ariel ;
Stone, Deborah ;
Sun, Hong-Wei ;
Greene, James ;
Barham, Beverly ;
Goldbach-Mansky, Raphaela ;
Kastner, Daniel L. ;
Aksentijevich, Ivona .
ANNALS OF THE RHEUMATIC DISEASES, 2013, 72 (06) :1064-1070
[5]  
Belcher J. D, 2013, ISRN OXIDATIVE MED, V2013
[6]   Unexpected expression of α- and β-globin in mesencephalic dopaminergic neurons and glial cells [J].
Biagioli, Marta ;
Pinto, Milena ;
Cesselli, Daniela ;
Zaninello, Marta ;
Lazarevic, Dejan ;
Roncaglia, Paola ;
Simone, Roberto ;
Vlachouli, Christina ;
Plessy, Charles ;
Bertin, Nicolas ;
Beltrami, Antonio ;
Kobayashi, Kazuto ;
Gallo, Vittorio ;
Santoro, Claudio ;
Ferrer, Isidro ;
Rivella, Stefano ;
Beltrami, Carlo Alberto ;
Carninci, Piero ;
Raviola, Elio ;
Gustincich, Stefano .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2009, 106 (36) :15454-15459
[7]   Upregulation and Mitochondrial Sequestration of Hemoglobin Occur in Circulating Leukocytes during Critical Illness, Conferring a Cytoprotective Phenotype [J].
Brunyanszki, Attila ;
Erdelyi, Katalin ;
Szczesny, Bartosz ;
Olah, Gabor ;
Salomao, Reinaldo ;
Herndon, David N. ;
Szabo, Csaba .
MOLECULAR MEDICINE, 2015, 21 :666-675
[8]   Shared and Distinct Aspects of the Sepsis Transcriptomic Response to Fecal Peritonitis and Pneumonia [J].
Burnham, Katie L. ;
Davenport, Emma E. ;
Radhakrishnan, Jayachandran ;
Humburg, Peter ;
Gordon, Anthony C. ;
Hutton, Paula ;
Svoren-Jabalera, Eduardo ;
Garrard, Christopher ;
Hill, Adrian V. S. ;
Hinds, Charles J. ;
Knight, Julian C. .
AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE, 2017, 196 (03) :328-339
[9]   A network-based analysis of systemic inflammation in humans [J].
Calvano, SE ;
Xiao, WZ ;
Richards, DR ;
Felciano, RM ;
Baker, HV ;
Cho, RJ ;
Chen, RO ;
Brownstein, BH ;
Cobb, JP ;
Tschoeke, SK ;
Miller-Graziano, C ;
Moldawer, LL ;
Mindrinos, MN ;
Davis, RW ;
Tompkins, RG ;
Lowry, SF .
NATURE, 2005, 437 (7061) :1032-1037
[10]   Erythroid-Specific Transcriptional Changes in PBMCs from Pulmonary Hypertension Patients [J].
Cheadle, Chris ;
Berger, Alan E. ;
Mathai, Stephen C. ;
Grigoryev, Dmitry N. ;
Watkins, Tonya N. ;
Sugawara, Yumiko ;
Barkataki, Sangjucta ;
Fan, Jinshui ;
Boorgula, Meher ;
Hummers, Laura ;
Zaiman, Ari L. ;
Girgis, Reda ;
McDevitt, Michael A. ;
Johns, Roger A. ;
Wigley, Frederick ;
Barnes, Kathleen C. ;
Hassoun, Paul M. .
PLOS ONE, 2012, 7 (04)