Structural Stability and Conformational Dynamics of Cytochrome c in Hydrated Deep Eutectic Solvents

被引:17
|
作者
Hossain, Sk Saddam [1 ]
Paul, Sneha [1 ,2 ]
Samanta, Anunay [1 ]
机构
[1] Univ Hyderabad, Sch Chem, Hyderabad 500046, India
[2] McGill Univ, Dept Chem, Montreal, PQ H3A 0B8, Canada
关键词
FLUORESCENCE CORRELATION SPECTROSCOPY; CHOLINE CHLORIDE; IONIC LIQUIDS; CIRCULAR-DICHROISM; ETHYLENE-GLYCOL; SINGLE-MOLECULE; SERUM-ALBUMIN; PROTEIN; GLYCEROL; LYSOZYME;
D O I
10.1021/acs.jpcb.1c01975
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Many deep eutectic solvents (DESs) are currently being explored as environment-friendly media for biorelated applications. As an understanding of the effect of these solvents on the structure of biomolecules is crucial for these applications, we study how two DESs comprising trimethylglycine (TMG) and ethylene glycol (EG) or glycerol (GL) influence the structural stability and conformational dynamics of cytochrome c (Cytc) using single-molecule-based fluorescence correlation spectroscopy (FCS) technique and several other ensemble-based biophysical methods. The FCS studies on A488-labeled Cytc enable an estimation of the size (20.5 +/- 1.5 angstrom) of the protein and capture its conformational dynamics (54 +/- 2 mu s) in aqueous buffered solution. It is observed that both size and conformational dynamics of the protein are influenced in the presence of the DESs, but this effect is more pronounced in the case of TMG-EG. The ensemble measurements on both labeled and wild-type Cytc reveal that the protein structure is unfolded completely by TMG-EG, whereas the structure is slightly altered by TMG-GL. The results suggest that the behavior of Cytc in hydrated DESs is determined by the strength of interactions between the DES constituents as well as that between the constituents and the water molecules present in the system.
引用
收藏
页码:5757 / 5765
页数:9
相关论文
共 50 条
  • [41] Liquid Structure and Dynamics of Tetraalkylammonium Bromide-Based Deep Eutectic Solvents: Effect of Cation Chain Length
    Hossain, Sk Saddam
    Paul, Sneha
    Samanta, Anunay
    JOURNAL OF PHYSICAL CHEMISTRY B, 2019, 123 (31) : 6842 - 6850
  • [42] An Overview of Structure and Dynamics Associated with Hydrophobic Deep Eutectic Solvents and Their Applications in Extraction Processes
    Malik, Akshay
    Dhattarwal, Harender S.
    Kashyap, Hemant K.
    CHEMPHYSCHEM, 2022, 23 (18)
  • [43] The impact of charges in force field parameterization for molecular dynamics simulations of deep eutectic solvents
    Garcia, Gregorio
    Atilhan, Mert
    Aparicio, Santiago
    JOURNAL OF MOLECULAR LIQUIDS, 2015, 211 : 506 - 514
  • [44] Behavior of Deep Eutectic Solvents under External Electric Fields: A Molecular Dynamics Approach
    Atilhan, Mert
    Aparicio, Santiago
    JOURNAL OF PHYSICAL CHEMISTRY B, 2017, 121 (01) : 221 - 232
  • [45] Thermostable Deep Eutectic Solvents for Thermochemical Reactions: Novel Stability Indicators
    Hariyanto, Yonchen
    Wong, Chen Wai
    Fisher, Adrian C.
    Kloyer, Leopold
    Chan, Eric Wei Chiang
    ACS SUSTAINABLE CHEMISTRY & ENGINEERING, 2024, 12 (17): : 6774 - 6785
  • [46] Benzaldehyde lyase (BAL)-catalyzed enantioselective C-C bond formation in deep-eutectic-solvents-buffer mixtures
    Maugeri, Zaira
    Dominguez de Maria, Pablo
    JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, 2014, 107 : 120 - 123
  • [47] Assessing the impact of choline chloride and benzyltrimethylammonium chloride-based deep eutectic solvents on the structure and conformational dynamics of bovine serum albumin: a combined steady-state, time-resolved fluorescence and fluorescence correlation spectroscopic study
    Barik, Sahadev
    Mahapatra, Amita
    Preeyanka, Naupada
    Sarkar, Moloy
    PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2023, 25 (29) : 20093 - 20108
  • [48] Hydration in Deep Eutectic Solvents Induces Non-monotonic Changes in the Conformation and Stability of Proteins
    Sanchez-Fernandez, Adrian
    Basic, Medina
    Xiang, Jenny
    Prevost, Sylvain
    Jackson, Andrew J.
    Dicko, Cedric
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2022, 144 (51) : 23657 - 23667
  • [49] Effect of deep eutectic solvents on activity, stability, and selectivity of enzymes: Novel insights and further prospects
    Zhou, Duan
    Chen, Xuefeng
    Li, Gaimiao
    Zhao, Mouming
    Li, Daoming
    INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2025, 284
  • [50] Molecular dynamics simulations of mixed deep eutectic solvents and their interaction with nanomaterials
    Atilhan, Mert
    Aparicio, Santiago
    JOURNAL OF MOLECULAR LIQUIDS, 2019, 283 : 147 - 154