DFT studies on the structural and vibrational properties of polyenes

被引:24
作者
Kupka, Teobald [1 ]
Buczek, Aneta [1 ]
Broda, Malgorzata A. [1 ]
Stachow, Michal [1 ]
Tarnowski, Przemyslaw [1 ]
机构
[1] Univ Opole, Fac Chem, 48 Oleska St, PL-45052 Opole, Poland
关键词
C=C bond; C-C bond; All-trans polyenes; All-cis polyenes; IR and Raman spectroscopy; DFT; CONFIGURATION-INTERACTION; SYSTEMATIC SEQUENCES; MOLLER-PLESSET; WAVE-FUNCTIONS; HARTREE-FOCK; BASIS-SET; RAMAN; ELECTRON; SPECTRA; ENERGIES;
D O I
10.1007/s00894-016-2969-1
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Detailed density functional theory (DFT) calculations on the structure and harmonic frequencies of model all-trans and all-cis polyenes were undertaken. For the first time, we report on the convergence of selected B3LYP/6-311++ G** and BLYP/6-311++G** calculated structural parameters resulting from a systematic increase in polyene size (chains containing 2 to 14 C=C units). The limiting values of the structural parameters for very long chains were estimated using simple three-parameter empirical formulae. BLYP/6-311++G** calculated nu(C=C) and nu(C-C) frequencies for all-trans and all-cis polyenes containing up to 14 carbon-carbon double bonds were used to estimate these values for very long chains. Correction of raw, unscaled vibrational data was performed by comparing theoretical and experimental wavenumbers for polyenes chains containing 3 to 12 conjugated C=C units with both ends substituted by tert-butyl groups. The corrected nu(C=C) and nu(C-C) wavenumbers for all-trans molecules were used to estimate the presence of 9 - 12 C=C units in all-trans polyene pigment in red coral.
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页数:11
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