ENCODE data at the ENCODE portal

被引：340

作者：

Sloan, Cricket A. ^{[1
]}

Chan, Esther T. ^{[1
]}

Davidson, Jean M. ^{[1
]}

Malladi, Venkat S. ^{[1
]}

Strattan, J. Seth ^{[1
]}

Hitz, Benjamin C. ^{[1
]}

Gabdank, Idan ^{[1
]}

Narayanan, Aditi K. ^{[1
]}

Ho, Marcus ^{[1
]}

Lee, Brian T. ^{[2
]}

Rowe, Laurence D. ^{[1
]}

Dreszer, Timothy R. ^{[1
]}

Roe, Greg ^{[1
]}

Podduturi, Nikhil R. ^{[1
]}

Tanaka, Forrest ^{[1
]}

Hong, Eurie L. ^{[1
]}

Cherry, J. Michael ^{[1
]}

机构：

[1] Stanford Univ, Dept Genet, Sch Med, Stanford, CA 94305 USA

[2] Univ Calif Santa Cruz, Ctr Biomol Sci & Engn, Santa Cruz, CA 95064 USA

来源：

NUCLEIC ACIDS RESEARCH | 2016年 / 44卷 / D1期

基金：

美国国家卫生研究院;

关键词：

WHOLE-GENOME DATA; REPRODUCIBILITY;

D O I：

10.1093/nar/gkv1160

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

The Encyclopedia of DNA Elements (ENCODE) Project is in its third phase of creating a comprehensive catalog of functional elements in the human genome. This phase of the project includes an expansion of assays that measure diverse RNA populations, identify proteins that interact with RNA and DNA, probe regions of DNA hypersensitivity, and measure levels of DNA methylation in a wide range of cell and tissue types to identify putative regulatory elements. To date, results for almost 5000 experiments have been released for use by the scientific community. These data are available for searching, visualization and download at the new ENCODE Portal (www.encodeproject.org). The revamped ENCODE Portal provides new ways to browse and search the ENCODE data based on the metadata that describe the assays as well as summaries of the assays that focus on data provenance. In addition, it is a flexible platform that allows integration of genomic data from multiple projects. The portal experience was designed to improve access to ENCODE data by relying on metadata that allow reusability and reproducibility of the experiments.

引用

页码：D726 / D732

页数：7

共 23 条

[1]

Agarwala R, 2015, NUCLEIC ACIDS RES, V43, pD6, DOI [10.1093/nar/gku1130, 10.1093/nar/gkv1290]

[2] BioProject and BioSample databases at NCBI: facilitating capture and organization of metadata [J].

Barrett, Tanya ;

Clark, Karen ;

Gevorgyan, Robert ;

Gorelenkov, Vyacheslav ;

Gribov, Eugene ;

Karsch-Mizrachi, Ilene ;

Kimelman, Michael ;

Pruitt, Kim D. ;

Resenchuk, Sergei ;

Tatusova, Tatiana ;

Yaschenko, Eugene ;

Ostell, James .

NUCLEIC ACIDS RESEARCH, 2012, 40 (D1) :D57-D63

[3] Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project [J].

Birney, Ewan ;

Stamatoyannopoulos, John A. ;

Dutta, Anindya ;

Guigo, Roderic ;

Gingeras, Thomas R. ;

Margulies, Elliott H. ;

Weng, Zhiping ;

Snyder, Michael ;

Dermitzakis, Emmanouil T. ;

Stamatoyannopoulos, John A. ;

Thurman, Robert E. ;

Kuehn, Michael S. ;

Taylor, Christopher M. ;

Neph, Shane ;

Koch, Christoph M. ;

Asthana, Saurabh ;

Malhotra, Ankit ;

Adzhubei, Ivan ;

Greenbaum, Jason A. ;

Andrews, Robert M. ;

Flicek, Paul ;

Boyle, Patrick J. ;

Cao, Hua ;

Carter, Nigel P. ;

Clelland, Gayle K. ;

Davis, Sean ;

Day, Nathan ;

Dhami, Pawandeep ;

Dillon, Shane C. ;

Dorschner, Michael O. ;

Fiegler, Heike ;

Giresi, Paul G. ;

Goldy, Jeff ;

Hawrylycz, Michael ;

Haydock, Andrew ;

Humbert, Richard ;

James, Keith D. ;

Johnson, Brett E. ;

Johnson, Ericka M. ;

Frum, Tristan T. ;

Rosenzweig, Elizabeth R. ;

Karnani, Neerja ;

Lee, Kirsten ;

Lefebvre, Gregory C. ;

Navas, Patrick A. ;

Neri, Fidencio ;

Parker, Stephen C. J. ;

Sabo, Peter J. ;

Sandstrom, Richard ;

Shafer, Anthony .

NATURE, 2007, 447 (7146) :799-816

[4] Comparative analysis of regulatory information and circuits across distant species [J].

Boyle, Alan P. ;

Araya, Carlos L. ;

Brdlik, Cathleen ;

Cayting, Philip ;

Cheng, Chao ;

Cheng, Yong ;

Gardner, Kathryn ;

Hillier, LaDeana W. ;

Janette, Judith ;

Jiang, Lixia ;

Kasper, Dionna ;

Kawli, Trupti ;

Kheradpour, Pouya ;

Kundaje, Anshul ;

Li, Jingyi Jessica ;

Ma, Lijia ;

Niu, Wei ;

Rehm, E. Jay ;

Rozowsky, Joel ;

Slattery, Matthew ;

Spokony, Rebecca ;

Terrell, Robert ;

Vafeados, Dionne ;

Wang, Daifeng ;

Weisdepp, Peter ;

Wu, Yi-Chieh ;

Xie, Dan ;

Yan, Koon-Kiu ;

Feingold, Elise A. ;

Good, Peter J. ;

Pazin, Michael J. ;

Huang, Haiyan ;

Bickel, Peter J. ;

Brenner, Steven E. ;

Reinke, Valerie ;

Waterston, Robert H. ;

Gerstein, Mark ;

White, Kevin P. ;

Kellis, Manolis ;

Snyder, Michael .

NATURE, 2014, 512 (7515) :453-+

[5] Ensembl 2015 [J].

Cunningham, Fiona ;

Amode, M. Ridwan ;

Barrell, Daniel ;

Beal, Kathryn ;

Billis, Konstantinos ;

Brent, Simon ;

Carvalho-Silva, Denise ;

Clapham, Peter ;

Coates, Guy ;

Fitzgerald, Stephen ;

Gil, Laurent ;

Giron, Carlos Garcia ;

Gordon, Leo ;

Hourlier, Thibaut ;

Hunt, Sarah E. ;

Janacek, Sophie H. ;

Johnson, Nathan ;

Juettemann, Thomas ;

Kaehaeri, Andreas K. ;

Keenan, Stephen ;

Martin, Fergal J. ;

Maurel, Thomas ;

McLaren, William ;

Murphy, Daniel N. ;

Nag, Rishi ;

Overduin, Bert ;

Parker, Anne ;

Patricio, Mateus ;

Perry, Emily ;

Pignatelli, Miguel ;

Riat, Harpreet Singh ;

Sheppard, Daniel ;

Taylor, Kieron ;

Thormann, Anja ;

Vullo, Alessandro ;

Wilder, Steven P. ;

Zadissa, Amonida ;

Aken, Bronwen L. ;

Birney, Ewan ;

Harrow, Jennifer ;

Kinsella, Rhoda ;

Muffato, Matthieu ;

Ruffier, Magali ;

Searle, Stephen M. J. ;

Spudich, Giulietta ;

Trevanion, Stephen J. ;

Yates, Andy ;

Zerbino, Daniel R. ;

Flicek, Paul .

NUCLEIC ACIDS RESEARCH, 2015, 43 (D1) :D662-D669

[6] An integrated encyclopedia of DNA elements in the human genome [J].

Dunham, Ian ;

Kundaje, Anshul ;

Aldred, Shelley F. ;

Collins, Patrick J. ;

Davis, CarrieA. ;

Doyle, Francis ;

Epstein, Charles B. ;

Frietze, Seth ;

Harrow, Jennifer ;

Kaul, Rajinder ;

Khatun, Jainab ;

Lajoie, Bryan R. ;

Landt, Stephen G. ;

Lee, Bum-Kyu ;

Pauli, Florencia ;

Rosenbloom, Kate R. ;

Sabo, Peter ;

Safi, Alexias ;

Sanyal, Amartya ;

Shoresh, Noam ;

Simon, Jeremy M. ;

Song, Lingyun ;

Trinklein, Nathan D. ;

Altshuler, Robert C. ;

Birney, Ewan ;

Brown, James B. ;

Cheng, Chao ;

Djebali, Sarah ;

Dong, Xianjun ;

Dunham, Ian ;

Ernst, Jason ;

Furey, Terrence S. ;

Gerstein, Mark ;

Giardine, Belinda ;

Greven, Melissa ;

Hardison, Ross C. ;

Harris, Robert S. ;

Herrero, Javier ;

Hoffman, Michael M. ;

Iyer, Sowmya ;

Kellis, Manolis ;

Khatun, Jainab ;

Kheradpour, Pouya ;

Kundaje, Anshul ;

Lassmann, Timo ;

Li, Qunhua ;

Lin, Xinying ;

Marinov, Georgi K. ;

Merkel, Angelika ;

Mortazavi, Ali .

NATURE, 2012, 489 (7414) :57-74

[7] The ENCODE (ENCyclopedia of DNA elements) Project [J].

Feingold, EA ;

Good, PJ ;

Guyer, MS ;

Kamholz, S ;

Liefer, L ;

Wetterstrand, K ;

Collins, FS ;

Gingeras, TR ;

Kampa, D ;

Sekinger, EA ;

Cheng, J ;

Hirsch, H ;

Ghosh, S ;

Zhu, Z ;

Pate, S ;

Piccolboni, A ;

Yang, A ;

Tammana, H ;

Bekiranov, S ;

Kapranov, P ;

Harrison, R ;

Church, G ;

Struhl, K ;

Ren, B ;

Kim, TH ;

Barrera, LO ;

Qu, C ;

Van Calcar, S ;

Luna, R ;

Glass, CK ;

Rosenfeld, MG ;

Guigo, R ;

Antonarakis, SE ;

Birney, E ;

Brent, M ;

Pachter, L ;

Reymond, A ;

Dermitzakis, ET ;

Dewey, C ;

Keefe, D ;

Denoeud, F ;

Lagarde, J ;

Ashurst, J ;

Hubbard, T ;

Wesselink, JJ ;

Castelo, R ;

Eyras, E ;

Myers, RM ;

Sidow, A ;

Batzoglou, S .

SCIENCE, 2004, 306 (5696) :636-640

[8] Comparative analysis of the transcriptome across distant species [J].

Gerstein, Mark B. ;

Rozowsky, Joel ;

Yan, Koon-Kiu ;

Wang, Daifeng ;

Cheng, Chao ;

Brown, James B. ;

Davis, Carrie A. ;

Hillier, LaDeana ;

Sisu, Cristina ;

Li, Jingyi Jessica ;

Pei, Baikang ;

Harmanci, Arif O. ;

Duff, Michael O. ;

Djebali, Sarah ;

Alexander, Roger P. ;

Alver, Burak H. ;

Auerbach, Raymond ;

Bell, Kimberly ;

Bickel, Peter J. ;

Boeck, Max E. ;

Boley, Nathan P. ;

Booth, Benjamin W. ;

Cherbas, Lucy ;

Cherbas, Peter ;

Di, Chao ;

Dobins, Alex ;

Drenkows, Jorg ;

Ewing, Brent ;

Fang, Gang ;

Fastucas, Megan ;

Feingold, Elise A. ;

Frankish, Adam ;

Gao, Guanjun ;

Good, Peter J. ;

Guigo, Roderic ;

Hammonds, Ann ;

Harrow, Jen ;

Hoskins, Roger A. ;

Howald, Cedric ;

Hu, Long ;

Huang, Haiyan ;

Hubbard, Tim J. P. ;

Huynh, Chau ;

Jhas, Sonali ;

Kasper, Dionna ;

Kato, Masaomi ;

Kaufman, Thomas C. ;

Kitchen, Robert R. ;

Ladewig, Erik ;

Lagarde, Julien .

NATURE, 2014, 512 (7515) :445-+

[9] Comparative analysis of metazoan chromatin organization [J].

Ho, Joshua W. K. ;

June, Youngsook L. ;

Liu, Tao ;

Alver, Burak H. ;

Lee, Soohyun ;

Ikegami, Kohta ;

Sohn, Kyung-Ah ;

Minoda, Aki ;

Tolstorukov, Michael Y. ;

Appert, Alex ;

Parker, Stephen C. J. ;

Gu, Tingting ;

Kundaje, Anshul ;

Riddle, Nicole C. ;

Bishop, Eric ;

Egelhofer, Thea A. ;

Hu, Sheng'en Shawn ;

Alekseyenko, Artyom A. ;

Rechtsteiner, Andreas ;

Asker, Dalal ;

Belsky, Jason A. ;

Bowmanm, Sarah K. ;

Chens, Q. Brent ;

Chen, Ron A. -J. ;

Day, Daniel S. ;

Dong, Yan ;

Dose, Andrea C. ;

Duan, Xikun ;

Epstein, Charles B. ;

Ercan, Sevinc ;

Feingold, Elise A. ;

Ferrari, Francesco ;

Garrigues, Jacob M. ;

Gehlenborg, Nils ;

Good, Peter J. ;

Haseley, Psalm ;

He, Daniel ;

Herrmann, Moritz ;

Hoffman, Michael M. ;

Jeffers, Tess E. ;

Kharchenko, Peter V. ;

Kolasinska-Zwierz, Paulina ;

Kotwaliwale, Chitra V. ;

Kumar, Nischay ;

Langley, Sasha A. ;

Larschan, Erica N. ;

Latorre, Isabel ;

Libbrecht, Maxwell W. ;

Lin, Xueqiu ;

Park, Richard .

NATURE, 2014, 512 (7515) :449-U507

[10] BigWig and BigBed: enabling browsing of large distributed datasets [J].

Kent, W. J. ;

Zweig, A. S. ;

Barber, G. ;

Hinrichs, A. S. ;

Karolchik, D. .

BIOINFORMATICS, 2010, 26 (17) :2204-2207

← 1 2 3 →

共 23 条

[1]

Agarwala R, 2015, NUCLEIC ACIDS RES, V43, pD6, DOI [10.1093/nar/gku1130, 10.1093/nar/gkv1290]

[2] BioProject and BioSample databases at NCBI: facilitating capture and organization of metadata [J].

Barrett, Tanya ;

Clark, Karen ;

Gevorgyan, Robert ;

Gorelenkov, Vyacheslav ;

Gribov, Eugene ;

Karsch-Mizrachi, Ilene ;

Kimelman, Michael ;

Pruitt, Kim D. ;

Resenchuk, Sergei ;

Tatusova, Tatiana ;

Yaschenko, Eugene ;

Ostell, James .

NUCLEIC ACIDS RESEARCH, 2012, 40 (D1) :D57-D63

[3] Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project [J].

Birney, Ewan ;

Stamatoyannopoulos, John A. ;

Dutta, Anindya ;

Guigo, Roderic ;

Gingeras, Thomas R. ;

Margulies, Elliott H. ;

Weng, Zhiping ;

Snyder, Michael ;

Dermitzakis, Emmanouil T. ;

Stamatoyannopoulos, John A. ;

Thurman, Robert E. ;

Kuehn, Michael S. ;

Taylor, Christopher M. ;

Neph, Shane ;

Koch, Christoph M. ;

Asthana, Saurabh ;

Malhotra, Ankit ;

Adzhubei, Ivan ;

Greenbaum, Jason A. ;

Andrews, Robert M. ;

Flicek, Paul ;

Boyle, Patrick J. ;

Cao, Hua ;

Carter, Nigel P. ;

Clelland, Gayle K. ;

Davis, Sean ;

Day, Nathan ;

Dhami, Pawandeep ;

Dillon, Shane C. ;

Dorschner, Michael O. ;

Fiegler, Heike ;

Giresi, Paul G. ;

Goldy, Jeff ;

Hawrylycz, Michael ;

Haydock, Andrew ;

Humbert, Richard ;

James, Keith D. ;

Johnson, Brett E. ;

Johnson, Ericka M. ;

Frum, Tristan T. ;

Rosenzweig, Elizabeth R. ;

Karnani, Neerja ;

Lee, Kirsten ;

Lefebvre, Gregory C. ;

Navas, Patrick A. ;

Neri, Fidencio ;

Parker, Stephen C. J. ;

Sabo, Peter J. ;

Sandstrom, Richard ;

Shafer, Anthony .

NATURE, 2007, 447 (7146) :799-816

[4] Comparative analysis of regulatory information and circuits across distant species [J].

Boyle, Alan P. ;

Araya, Carlos L. ;

Brdlik, Cathleen ;

Cayting, Philip ;

Cheng, Chao ;

Cheng, Yong ;

Gardner, Kathryn ;

Hillier, LaDeana W. ;

Janette, Judith ;

Jiang, Lixia ;

Kasper, Dionna ;

Kawli, Trupti ;

Kheradpour, Pouya ;

Kundaje, Anshul ;

Li, Jingyi Jessica ;

Ma, Lijia ;

Niu, Wei ;

Rehm, E. Jay ;

Rozowsky, Joel ;

Slattery, Matthew ;

Spokony, Rebecca ;

Terrell, Robert ;

Vafeados, Dionne ;

Wang, Daifeng ;

Weisdepp, Peter ;

Wu, Yi-Chieh ;

Xie, Dan ;

Yan, Koon-Kiu ;

Feingold, Elise A. ;

Good, Peter J. ;

Pazin, Michael J. ;

Huang, Haiyan ;

Bickel, Peter J. ;

Brenner, Steven E. ;

Reinke, Valerie ;

Waterston, Robert H. ;

Gerstein, Mark ;

White, Kevin P. ;

Kellis, Manolis ;

Snyder, Michael .

NATURE, 2014, 512 (7515) :453-+

[5] Ensembl 2015 [J].

Cunningham, Fiona ;

Amode, M. Ridwan ;

Barrell, Daniel ;

Beal, Kathryn ;

Billis, Konstantinos ;

Brent, Simon ;

Carvalho-Silva, Denise ;

Clapham, Peter ;

Coates, Guy ;

Fitzgerald, Stephen ;

Gil, Laurent ;

Giron, Carlos Garcia ;

Gordon, Leo ;

Hourlier, Thibaut ;

Hunt, Sarah E. ;

Janacek, Sophie H. ;

Johnson, Nathan ;

Juettemann, Thomas ;

Kaehaeri, Andreas K. ;

Keenan, Stephen ;

Martin, Fergal J. ;

Maurel, Thomas ;

McLaren, William ;

Murphy, Daniel N. ;

Nag, Rishi ;

Overduin, Bert ;

Parker, Anne ;

Patricio, Mateus ;

Perry, Emily ;

Pignatelli, Miguel ;

Riat, Harpreet Singh ;

Sheppard, Daniel ;

Taylor, Kieron ;

Thormann, Anja ;

Vullo, Alessandro ;

Wilder, Steven P. ;

Zadissa, Amonida ;

Aken, Bronwen L. ;

Birney, Ewan ;

Harrow, Jennifer ;

Kinsella, Rhoda ;

Muffato, Matthieu ;

Ruffier, Magali ;

Searle, Stephen M. J. ;

Spudich, Giulietta ;

Trevanion, Stephen J. ;

Yates, Andy ;

Zerbino, Daniel R. ;

Flicek, Paul .

NUCLEIC ACIDS RESEARCH, 2015, 43 (D1) :D662-D669

[6] An integrated encyclopedia of DNA elements in the human genome [J].

Dunham, Ian ;

Kundaje, Anshul ;

Aldred, Shelley F. ;

Collins, Patrick J. ;

Davis, CarrieA. ;

Doyle, Francis ;

Epstein, Charles B. ;

Frietze, Seth ;

Harrow, Jennifer ;

Kaul, Rajinder ;

Khatun, Jainab ;

Lajoie, Bryan R. ;

Landt, Stephen G. ;

Lee, Bum-Kyu ;

Pauli, Florencia ;

Rosenbloom, Kate R. ;

Sabo, Peter ;

Safi, Alexias ;

Sanyal, Amartya ;

Shoresh, Noam ;

Simon, Jeremy M. ;

Song, Lingyun ;

Trinklein, Nathan D. ;

Altshuler, Robert C. ;

Birney, Ewan ;

Brown, James B. ;

Cheng, Chao ;

Djebali, Sarah ;

Dong, Xianjun ;

Dunham, Ian ;

Ernst, Jason ;

Furey, Terrence S. ;

Gerstein, Mark ;

Giardine, Belinda ;

Greven, Melissa ;

Hardison, Ross C. ;

Harris, Robert S. ;

Herrero, Javier ;

Hoffman, Michael M. ;

Iyer, Sowmya ;

Kellis, Manolis ;

Khatun, Jainab ;

Kheradpour, Pouya ;

Kundaje, Anshul ;

Lassmann, Timo ;

Li, Qunhua ;

Lin, Xinying ;

Marinov, Georgi K. ;

Merkel, Angelika ;

Mortazavi, Ali .

NATURE, 2012, 489 (7414) :57-74

[7] The ENCODE (ENCyclopedia of DNA elements) Project [J].

Feingold, EA ;

Good, PJ ;

Guyer, MS ;

Kamholz, S ;

Liefer, L ;

Wetterstrand, K ;

Collins, FS ;

Gingeras, TR ;

Kampa, D ;

Sekinger, EA ;

Cheng, J ;

Hirsch, H ;

Ghosh, S ;

Zhu, Z ;

Pate, S ;

Piccolboni, A ;

Yang, A ;

Tammana, H ;

Bekiranov, S ;

Kapranov, P ;

Harrison, R ;

Church, G ;

Struhl, K ;

Ren, B ;

Kim, TH ;

Barrera, LO ;

Qu, C ;

Van Calcar, S ;

Luna, R ;

Glass, CK ;

Rosenfeld, MG ;

Guigo, R ;

Antonarakis, SE ;

Birney, E ;

Brent, M ;

Pachter, L ;

Reymond, A ;

Dermitzakis, ET ;

Dewey, C ;

Keefe, D ;

Denoeud, F ;

Lagarde, J ;

Ashurst, J ;

Hubbard, T ;

Wesselink, JJ ;

Castelo, R ;

Eyras, E ;

Myers, RM ;

Sidow, A ;

Batzoglou, S .

SCIENCE, 2004, 306 (5696) :636-640

[8] Comparative analysis of the transcriptome across distant species [J].

Gerstein, Mark B. ;

Rozowsky, Joel ;

Yan, Koon-Kiu ;

Wang, Daifeng ;

Cheng, Chao ;

Brown, James B. ;

Davis, Carrie A. ;

Hillier, LaDeana ;

Sisu, Cristina ;

Li, Jingyi Jessica ;

Pei, Baikang ;

Harmanci, Arif O. ;

Duff, Michael O. ;

Djebali, Sarah ;

Alexander, Roger P. ;

Alver, Burak H. ;

Auerbach, Raymond ;

Bell, Kimberly ;

Bickel, Peter J. ;

Boeck, Max E. ;

Boley, Nathan P. ;

Booth, Benjamin W. ;

Cherbas, Lucy ;

Cherbas, Peter ;

Di, Chao ;

Dobins, Alex ;

Drenkows, Jorg ;

Ewing, Brent ;

Fang, Gang ;

Fastucas, Megan ;

Feingold, Elise A. ;

Frankish, Adam ;

Gao, Guanjun ;

Good, Peter J. ;

Guigo, Roderic ;

Hammonds, Ann ;

Harrow, Jen ;

Hoskins, Roger A. ;

Howald, Cedric ;

Hu, Long ;

Huang, Haiyan ;

Hubbard, Tim J. P. ;

Huynh, Chau ;

Jhas, Sonali ;

Kasper, Dionna ;

Kato, Masaomi ;

Kaufman, Thomas C. ;

Kitchen, Robert R. ;

Ladewig, Erik ;

Lagarde, Julien .

NATURE, 2014, 512 (7515) :445-+

[9] Comparative analysis of metazoan chromatin organization [J].

Ho, Joshua W. K. ;

June, Youngsook L. ;

Liu, Tao ;

Alver, Burak H. ;

Lee, Soohyun ;

Ikegami, Kohta ;

Sohn, Kyung-Ah ;

Minoda, Aki ;

Tolstorukov, Michael Y. ;

Appert, Alex ;

Parker, Stephen C. J. ;

Gu, Tingting ;

Kundaje, Anshul ;

Riddle, Nicole C. ;

Bishop, Eric ;

Egelhofer, Thea A. ;

Hu, Sheng'en Shawn ;

Alekseyenko, Artyom A. ;

Rechtsteiner, Andreas ;

Asker, Dalal ;

Belsky, Jason A. ;

Bowmanm, Sarah K. ;

Chens, Q. Brent ;

Chen, Ron A. -J. ;

Day, Daniel S. ;

Dong, Yan ;

Dose, Andrea C. ;

Duan, Xikun ;

Epstein, Charles B. ;

Ercan, Sevinc ;

Feingold, Elise A. ;

Ferrari, Francesco ;

Garrigues, Jacob M. ;

Gehlenborg, Nils ;

Good, Peter J. ;

Haseley, Psalm ;

He, Daniel ;

Herrmann, Moritz ;

Hoffman, Michael M. ;

Jeffers, Tess E. ;

Kharchenko, Peter V. ;

Kolasinska-Zwierz, Paulina ;

Kotwaliwale, Chitra V. ;

Kumar, Nischay ;

Langley, Sasha A. ;

Larschan, Erica N. ;

Latorre, Isabel ;

Libbrecht, Maxwell W. ;

Lin, Xueqiu ;

Park, Richard .

NATURE, 2014, 512 (7515) :449-U507

[10] BigWig and BigBed: enabling browsing of large distributed datasets [J].

Kent, W. J. ;

Zweig, A. S. ;

Barber, G. ;

Hinrichs, A. S. ;

Karolchik, D. .

BIOINFORMATICS, 2010, 26 (17) :2204-2207

← 1 2 3 →