The popularity of machine learning (ML) across drug discovery continues to grow, yielding impressive results. As their use increases, so do their limitations become apparent. Such limitations include their need for big data, sparsity in data, and their lack of interpretability. It has also become apparent that the techniques are not truly autonomous, requiring retraining even post deployment. In this review, we detail the use of advanced techniques to circumvent these challenges, with examples drawn from drug discovery and allied disciplines. In addition, we present emerging techniques and their potential role in drug discovery. The techniques presented herein are anticipated to expand the applicability of ML in drug discovery. The popularity of machine learning (ML) across drug discovery continues to grow, yielding impressive results. As their use increases, so do their limitations become apparent. Such limitations include their need for big data, sparsity in data, and their lack of interpretability. It has also become apparent that the techniques are not truly autonomous, requiring retraining even post deployment. In this review, we detail the use of advanced techniques to circumvent these challenges, with examples drawn from drug discovery and allied disciplines. In addition, we present emerging techniques and their potential role in drug discovery. The techniques presented herein are anticipated to expand the applicability of ML in drug discovery.
机构:
AstraZeneca R&D Gothenburg, Innovat Med & Early Dev Biotech Unit, Hit Discovery, Discovery Sci, S-43183 Molndal, SwedenAstraZeneca R&D Gothenburg, Innovat Med & Early Dev Biotech Unit, Hit Discovery, Discovery Sci, S-43183 Molndal, Sweden
Chen, Hongming
Engkvist, Ola
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AstraZeneca R&D Gothenburg, Innovat Med & Early Dev Biotech Unit, Hit Discovery, Discovery Sci, S-43183 Molndal, SwedenAstraZeneca R&D Gothenburg, Innovat Med & Early Dev Biotech Unit, Hit Discovery, Discovery Sci, S-43183 Molndal, Sweden
Engkvist, Ola
Wang, Yinhai
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h-index: 0
机构:
AstraZeneca, Innovat Med & Early Dev Biotech Unit, Discovery Sci, Quantitat Biol, Unit 310,Cambridge Sci Pk,Milton Rd, Cambridge CB4 0WG, EnglandAstraZeneca R&D Gothenburg, Innovat Med & Early Dev Biotech Unit, Hit Discovery, Discovery Sci, S-43183 Molndal, Sweden
Wang, Yinhai
Olivecrona, Marcus
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机构:
AstraZeneca R&D Gothenburg, Innovat Med & Early Dev Biotech Unit, Hit Discovery, Discovery Sci, S-43183 Molndal, SwedenAstraZeneca R&D Gothenburg, Innovat Med & Early Dev Biotech Unit, Hit Discovery, Discovery Sci, S-43183 Molndal, Sweden
Olivecrona, Marcus
Blaschke, Thomas
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h-index: 0
机构:
AstraZeneca R&D Gothenburg, Innovat Med & Early Dev Biotech Unit, Hit Discovery, Discovery Sci, S-43183 Molndal, SwedenAstraZeneca R&D Gothenburg, Innovat Med & Early Dev Biotech Unit, Hit Discovery, Discovery Sci, S-43183 Molndal, Sweden
机构:
AstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, EnglandAstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, England
Davies, Michael
Jones, Rhys D. O.
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h-index: 0
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AstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, EnglandAstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, England
Jones, Rhys D. O.
Grime, Ken
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h-index: 0
机构:
AstraZeneca, DMPK, Res & Early Dev, Resp Inflammat & Autoimmune BioPhannaceut R&D, Gothenburg, SwedenAstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, England
Grime, Ken
Jansson-Lofmark, Rasmus
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h-index: 0
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AstraZeneca, DMPK, Res & Early Dev, Cardiovasc Renal & Metab BioPharmaceut R&D, Gothenburg, SwedenAstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, England
Jansson-Lofmark, Rasmus
Fretland, Adrian J.
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h-index: 0
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AstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Boston, MA USAAstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, England
Fretland, Adrian J.
Winiwarter, Susanne
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h-index: 0
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AstraZeneca, DMPK, Res & Early Dev, Cardiovasc Renal & Metab BioPharmaceut R&D, Gothenburg, SwedenAstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, England
Winiwarter, Susanne
Morgan, Paul
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h-index: 0
机构:
AstraZeneca, Clin Pharmacol & Safety Sci R&D, Mechanist Safety & ADME Sci, Cambridge, EnglandAstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, England
Morgan, Paul
McGinnity, Dermot F.
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h-index: 0
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AstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, EnglandAstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, England
机构:
Univ British Columbia, Dept Comp Sci, Vancouver, BC V6T 1Z4, Canada
BC Canc Agcy, Dept Mol Oncol, Vancouver, BC V5Z 1L3, Canada
Univ British Columbia, Dept Pathol & Lab Med, Vancouver, BC V6T 2B5, Canada
Broad Inst MIT & Harvard, Cambridge, MA 02142 USAUniv British Columbia, Dept Comp Sci, Vancouver, BC V6T 1Z4, Canada
Ding, Jiarui
Condon, Anne
论文数: 0引用数: 0
h-index: 0
机构:
Univ British Columbia, Dept Comp Sci, Vancouver, BC V6T 1Z4, CanadaUniv British Columbia, Dept Comp Sci, Vancouver, BC V6T 1Z4, Canada
Condon, Anne
Shah, Sohrab P.
论文数: 0引用数: 0
h-index: 0
机构:
Univ British Columbia, Dept Comp Sci, Vancouver, BC V6T 1Z4, Canada
BC Canc Agcy, Dept Mol Oncol, Vancouver, BC V5Z 1L3, Canada
Univ British Columbia, Dept Pathol & Lab Med, Vancouver, BC V6T 2B5, Canada
Mem Sloan Kettering Canc Ctr, 1275 York Ave, New York, NY 10065 USAUniv British Columbia, Dept Comp Sci, Vancouver, BC V6T 1Z4, Canada
机构:
Michigan State Univ, Dept Math, E Lansing, MI 48824 USAMichigan State Univ, Dept Math, E Lansing, MI 48824 USA
Gao, Kaifu
Duc Duy Nguyen
论文数: 0引用数: 0
h-index: 0
机构:
Michigan State Univ, Dept Math, E Lansing, MI 48824 USAMichigan State Univ, Dept Math, E Lansing, MI 48824 USA
Duc Duy Nguyen
Tu, Meihua
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h-index: 0
机构:
Pfizer Med Design, Cambridge, MA 02139 USAMichigan State Univ, Dept Math, E Lansing, MI 48824 USA
Tu, Meihua
Wei, Guo-Wei
论文数: 0引用数: 0
h-index: 0
机构:
Michigan State Univ, Dept Math, Dept Biochem & Mol Biol, E Lansing, MI 48824 USA
Michigan State Univ, Dept Elect & Comp Engn, E Lansing, MI 48824 USAMichigan State Univ, Dept Math, E Lansing, MI 48824 USA
机构:
AstraZeneca R&D Gothenburg, Innovat Med & Early Dev Biotech Unit, Hit Discovery, Discovery Sci, S-43183 Molndal, SwedenAstraZeneca R&D Gothenburg, Innovat Med & Early Dev Biotech Unit, Hit Discovery, Discovery Sci, S-43183 Molndal, Sweden
Chen, Hongming
Engkvist, Ola
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca R&D Gothenburg, Innovat Med & Early Dev Biotech Unit, Hit Discovery, Discovery Sci, S-43183 Molndal, SwedenAstraZeneca R&D Gothenburg, Innovat Med & Early Dev Biotech Unit, Hit Discovery, Discovery Sci, S-43183 Molndal, Sweden
Engkvist, Ola
Wang, Yinhai
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca, Innovat Med & Early Dev Biotech Unit, Discovery Sci, Quantitat Biol, Unit 310,Cambridge Sci Pk,Milton Rd, Cambridge CB4 0WG, EnglandAstraZeneca R&D Gothenburg, Innovat Med & Early Dev Biotech Unit, Hit Discovery, Discovery Sci, S-43183 Molndal, Sweden
Wang, Yinhai
Olivecrona, Marcus
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca R&D Gothenburg, Innovat Med & Early Dev Biotech Unit, Hit Discovery, Discovery Sci, S-43183 Molndal, SwedenAstraZeneca R&D Gothenburg, Innovat Med & Early Dev Biotech Unit, Hit Discovery, Discovery Sci, S-43183 Molndal, Sweden
Olivecrona, Marcus
Blaschke, Thomas
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca R&D Gothenburg, Innovat Med & Early Dev Biotech Unit, Hit Discovery, Discovery Sci, S-43183 Molndal, SwedenAstraZeneca R&D Gothenburg, Innovat Med & Early Dev Biotech Unit, Hit Discovery, Discovery Sci, S-43183 Molndal, Sweden
机构:
AstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, EnglandAstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, England
Davies, Michael
Jones, Rhys D. O.
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, EnglandAstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, England
Jones, Rhys D. O.
Grime, Ken
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca, DMPK, Res & Early Dev, Resp Inflammat & Autoimmune BioPhannaceut R&D, Gothenburg, SwedenAstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, England
Grime, Ken
Jansson-Lofmark, Rasmus
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca, DMPK, Res & Early Dev, Cardiovasc Renal & Metab BioPharmaceut R&D, Gothenburg, SwedenAstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, England
Jansson-Lofmark, Rasmus
Fretland, Adrian J.
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Boston, MA USAAstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, England
Fretland, Adrian J.
Winiwarter, Susanne
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca, DMPK, Res & Early Dev, Cardiovasc Renal & Metab BioPharmaceut R&D, Gothenburg, SwedenAstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, England
Winiwarter, Susanne
Morgan, Paul
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca, Clin Pharmacol & Safety Sci R&D, Mechanist Safety & ADME Sci, Cambridge, EnglandAstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, England
Morgan, Paul
McGinnity, Dermot F.
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, EnglandAstraZeneca, DMPK, Res & Early Dev, Oncol R&D, Cambridge, England
机构:
Univ British Columbia, Dept Comp Sci, Vancouver, BC V6T 1Z4, Canada
BC Canc Agcy, Dept Mol Oncol, Vancouver, BC V5Z 1L3, Canada
Univ British Columbia, Dept Pathol & Lab Med, Vancouver, BC V6T 2B5, Canada
Broad Inst MIT & Harvard, Cambridge, MA 02142 USAUniv British Columbia, Dept Comp Sci, Vancouver, BC V6T 1Z4, Canada
Ding, Jiarui
Condon, Anne
论文数: 0引用数: 0
h-index: 0
机构:
Univ British Columbia, Dept Comp Sci, Vancouver, BC V6T 1Z4, CanadaUniv British Columbia, Dept Comp Sci, Vancouver, BC V6T 1Z4, Canada
Condon, Anne
Shah, Sohrab P.
论文数: 0引用数: 0
h-index: 0
机构:
Univ British Columbia, Dept Comp Sci, Vancouver, BC V6T 1Z4, Canada
BC Canc Agcy, Dept Mol Oncol, Vancouver, BC V5Z 1L3, Canada
Univ British Columbia, Dept Pathol & Lab Med, Vancouver, BC V6T 2B5, Canada
Mem Sloan Kettering Canc Ctr, 1275 York Ave, New York, NY 10065 USAUniv British Columbia, Dept Comp Sci, Vancouver, BC V6T 1Z4, Canada
机构:
Michigan State Univ, Dept Math, E Lansing, MI 48824 USAMichigan State Univ, Dept Math, E Lansing, MI 48824 USA
Gao, Kaifu
Duc Duy Nguyen
论文数: 0引用数: 0
h-index: 0
机构:
Michigan State Univ, Dept Math, E Lansing, MI 48824 USAMichigan State Univ, Dept Math, E Lansing, MI 48824 USA
Duc Duy Nguyen
Tu, Meihua
论文数: 0引用数: 0
h-index: 0
机构:
Pfizer Med Design, Cambridge, MA 02139 USAMichigan State Univ, Dept Math, E Lansing, MI 48824 USA
Tu, Meihua
Wei, Guo-Wei
论文数: 0引用数: 0
h-index: 0
机构:
Michigan State Univ, Dept Math, Dept Biochem & Mol Biol, E Lansing, MI 48824 USA
Michigan State Univ, Dept Elect & Comp Engn, E Lansing, MI 48824 USAMichigan State Univ, Dept Math, E Lansing, MI 48824 USA