Quantitive evaluation of macromolecular crystallization experiments using 1,8-ANS fluorescence

被引:10
|
作者
Watts, David [1 ]
Mueller-Dieckmann, Jochen [1 ]
Tsakanova, Gohar [1 ]
Lamzin, Victor S. [1 ]
Groves, Matthew R. [1 ]
机构
[1] DESY, EMBL Hamburg, D-22603 Hamburg, Germany
关键词
DYNAMIC LIGHT-SCATTERING; HIGH-THROUGHPUT CRYSTALLIZATION; PROTEIN-CRYSTALLIZATION; TEXTURE CHARACTERIZATION; CRYSTALS; CLASSIFICATION; TRIALS; CRYSTALLOGRAPHY; IRRADIATION; NUCLEATION;
D O I
10.1107/S0907444910020664
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Modern X-ray structure analysis and advances in high-throughput robotics have allowed a significant increase in the number of conditions screened for a given sample volume. An efficient evaluation of the increased amount of crystallization trials in order to identify successful experiments is now urgently required. A novel approach is presented for the visualization of crystallization experiments using fluorescence from trace amounts of a nonspecific dye. The fluorescence images obtained strongly contrast protein crystals against other phenomena, such as precipitation and phase separation. Novel software has been developed to quantitatively evaluate the crystallization outcome based on a biophysical metric correlated with voxel protein concentration. In > 1500 trials, 85.6% of the successful crystallization experiments were correctly identified, yielding a 50% reduction in the number of 'missed hits' compared with current automated approaches. The use of the method in the crystallization of three previously uncharacterized proteins from the malarial parasite Plasmodium falciparum is further demonstrated.
引用
收藏
页码:901 / 908
页数:8
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