Complete chloroplast genome of Lonicera crassifolia Batalin (Caprifoliaceae) and its phylogenetic implications

被引:3
|
作者
Chen, Chao [1 ,2 ]
Qu, Da-Hao [3 ]
Shan, Fang-Quan [4 ]
Jin, Ze-Xin [1 ]
Sun, Zhong-Shuai [1 ]
机构
[1] Taizhou Univ, Zhejiang Prov Key Lab Plant Evolutionary Ecol & C, 1139 Shifu Rd, Taizhou 317000, Peoples R China
[2] Shanghai Normal Univ, Coll Life Sci, Shanghai, Peoples R China
[3] Taizhou Univ, Coll Life Sci, Taizhou, Peoples R China
[4] Taizhou Green Heart Tourism Dev Promot Ctr, Taizhou, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2022年 / 7卷 / 05期
关键词
Lonicera crassifolia; Lonicera; chloroplast genome; phylogenomics;
D O I
10.1080/23802359.2022.2068979
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Lonicera crassifolia is a prostrate or creeping, evergreen Lonicera species endemic to southwest China. Here, we reported the complete chloroplast (cp) genome of L. crassifolia (GenBank accession number: OK393707). The cp genome was 154,731 bp long, with a large single-copy region (LSC) of 88,619 bp and a small single-copy region (SSC) of 18,642 bp separated by a pair of inverted repeats (IRs) of 23,735 bp. It encodes 130 genes, including 85 protein-coding genes, 37 tRNA genes, and 8 ribosomal RNA genes. We also reconstructed the phylogeny of Lonicera using the maximum-likelihood (ML) method, including our data and previously reported cp genomes of related taxa. The phylogenetic analysis showed that L. crassifolia is a sister to the remaining Nintooa clade with strong bootstrap support.
引用
收藏
页码:732 / 734
页数:3
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