Hepatic proteome network data in zebrafish (Danio rerio) liver following dieldrin exposure

被引:1
作者
Simmons, Denina B. D. [1 ]
Cowie, Andrew M. [2 ,3 ]
Koh, Jin [4 ]
Sherry, James P. [5 ]
Martyniuk, Christopher J. [2 ,3 ,4 ,6 ,7 ]
机构
[1] Univ Ontario Inst Technol, Fac Sci, Oshawa, ON L1H 7K4, Canada
[2] Univ New Brunswick, Canadian Rivers Inst, St John, NB E2L 4L5, Canada
[3] Univ New Brunswick, Dept Biol, St John, NB E2L 4L5, Canada
[4] Univ Florida, Interdisciplinary Ctr Biotechnol Res, Gainesville, FL 32611 USA
[5] Environm & Climate Change Canada, Water Sci & Technol, Aquat Contaminants Res Div, Burlington, ON L7S 1A1, Canada
[6] Univ Florida, Dept Physiol Sci, Coll Vet Med, Genet Inst, Gainesville, FL 32611 USA
[7] Univ Florida, Ctr Environm & Human Toxicol, Coll Vet Med, Genet Inst, Gainesville, FL 32611 USA
来源
DATA IN BRIEF | 2019年 / 25卷
基金
加拿大自然科学与工程研究理事会;
关键词
Pesticide; Proteomics; Biomarker; Aquatics; Hepatotoxicity; Zebrafish; Bioinformatics;
D O I
10.1016/j.dib.2019.104351
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Dieldrin is an environmental contaminant that adversely affects aquatic organisms. The data presented in this study are proteomic data collected in liver of zebrafish that were exposed to the pesticide in a dietary exposure. For label free proteomics, data were collected with a quadrupole Time-of-Flight mass spectrometer and for iTRAQ proteomics, data were acquired using a hybrid quadrupole Orbitrap (Q Exactive) MS system. Using formic acid digestion and label free proteomics, 2,061 proteins were identified, and among those, 103 were differentially abundant (p < 0.05 in at least one dose). In addition, iTRAQ proteomics identified 722 proteins in the liver of zebrafish following dieldrin treatment. The label-free approach identified 21 proteins that followed a dose dependent response. Of the differentially abundant proteins identified by iTRAQ, there were 26 unique expression patterns for proteins based on the three doses of dieldrin. Proteins were queried for disease networks to learn more about adverse effects in the liver following dieldrin exposure. Differentially abundant proteins were related to metabolic disease, steatohepatitis and lipid metabolism disorders, drug-induced liver injury, neoplasms, tissue degeneration and liver metastasis. The proteomics data described here is associated with a research article, "Label-free and iTRAQ proteomics analysis in the liver of zebrafish (Danio rerio) following a dietary exposure to the organochlorine pesticide dieldrin" (Simmons et al. 2019). This investigation reveals new biomarkers of toxicity and will be of interest to those studying aquatic toxicology and pesticides. (c) 2019 The Authors. Published by Elsevier Inc. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
引用
收藏
页数:10
相关论文
共 50 条
[21]   Whole body proteome response to a dietary lysine imbalance in zebrafish Danio rerio [J].
Gomez-Requeni, Pedro ;
de Vareilles, Mahaut ;
Kousoulaki, Katerina ;
Jordal, Ann-Elise O. ;
Conceicao, Luis E. C. ;
Ronnestad, Ivar .
COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS, 2011, 6 (02) :178-186
[22]   Dichlorvos exposure results in large scale disruption of energy metabolism in the liver of the zebrafish, Danio rerio [J].
Bui-Nguyen, Tri M. ;
Baer, Christine E. ;
Lewis, John A. ;
Yang, Dongren ;
Lein, Pamela J. ;
Jackson, David A. .
BMC GENOMICS, 2015, 16
[23]   Dichlorvos exposure results in large scale disruption of energy metabolism in the liver of the zebrafish, Danio rerio [J].
Tri M. Bui-Nguyen ;
Christine E. Baer ;
John A. Lewis ;
Dongren Yang ;
Pamela J. Lein ;
David A. Jackson .
BMC Genomics, 16
[24]   Cardiac toxicity of acrolein exposure in embryonic zebrafish (Danio rerio) [J].
Sezgi Arman ;
Sema İşisağ Üçüncü .
Environmental Science and Pollution Research, 2020, 27 :22423-22433
[25]   Hypoxia-induced changes in the zebrafish (Danio rerio) skeletal muscle proteome [J].
Chen, Kan ;
Cole, Richard B. ;
Rees, Bernard B. .
JOURNAL OF PROTEOMICS, 2013, 78 :477-485
[26]   The Effect of Taurine on Hepatic Steatosis Induced by Thioacetamide in Zebrafish (Danio rerio) [J].
Thais Ortiz Hammes ;
Gabriela Lima Pedroso ;
Carolina Rigatti Hartmann ;
Thayssa Dalla Costa Escobar ;
Laisa Beduschi Fracasso ;
Darlan Pase da Rosa ;
Norma Possa Marroni ;
Marilene Porawski ;
Themis Reverbel da Silveira .
Digestive Diseases and Sciences, 2012, 57 :675-682
[27]   Lectins As Effective Tools in the Study of the Biliary Network and the Parenchymal Architecture of the Zebrafish (Danio rerio) Liver [J].
Bhavsar, Hayden ;
Robinson, Zoe ;
Benson, Matthew ;
Getachew, Feven ;
Gonzalez-Rosa, Juan Manuel ;
Lafontant, Pascal J. .
ZEBRAFISH, 2024, 21 (02) :177-180
[28]   Molecular networks related to the immune system and mitochondria are targets for the pesticide dieldrin in the zebrafish (Danio rerio) central nervous system [J].
Cowie, Andrew M. ;
Sarty, Kathleena I. ;
Mercer, Angella ;
Koh, Jin ;
Kidd, Karen A. ;
Martyniuk, Christopher J. .
JOURNAL OF PROTEOMICS, 2017, 157 :71-82
[29]   Proteome changes in larval zebrafish (Danio rerio) and fathead minnow (Pimephales promelas) exposed to (±) anatoxin-a [J].
Langan, Laura M. ;
Lovin, Lea M. ;
Taylor, Raegyn B. ;
Scarlett, Kendall R. ;
Chambliss, C. Kevin ;
Chatterjee, Saurabh ;
Scott, J. Thad ;
Brooks, Bryan W. .
ENVIRONMENT INTERNATIONAL, 2024, 185
[30]   Effects of chronic exposure to nonylphenol on locomotor activity and social behavior in zebrafish(Danio rerio) [J].
Jigang XiaCuijuan Niu Xuejiao Pei Ministry of Education Key Laboratory of Biodiversity Science and Ecological EngineeringCollege of Life SciencesBeijing Normal University BeijingChina .
Journal of Environmental Sciences, 2010, (09) :1435-1440