Hepatic proteome network data in zebrafish (Danio rerio) liver following dieldrin exposure

被引:1
|
作者
Simmons, Denina B. D. [1 ]
Cowie, Andrew M. [2 ,3 ]
Koh, Jin [4 ]
Sherry, James P. [5 ]
Martyniuk, Christopher J. [2 ,3 ,4 ,6 ,7 ]
机构
[1] Univ Ontario Inst Technol, Fac Sci, Oshawa, ON L1H 7K4, Canada
[2] Univ New Brunswick, Canadian Rivers Inst, St John, NB E2L 4L5, Canada
[3] Univ New Brunswick, Dept Biol, St John, NB E2L 4L5, Canada
[4] Univ Florida, Interdisciplinary Ctr Biotechnol Res, Gainesville, FL 32611 USA
[5] Environm & Climate Change Canada, Water Sci & Technol, Aquat Contaminants Res Div, Burlington, ON L7S 1A1, Canada
[6] Univ Florida, Dept Physiol Sci, Coll Vet Med, Genet Inst, Gainesville, FL 32611 USA
[7] Univ Florida, Ctr Environm & Human Toxicol, Coll Vet Med, Genet Inst, Gainesville, FL 32611 USA
来源
DATA IN BRIEF | 2019年 / 25卷
基金
加拿大自然科学与工程研究理事会;
关键词
Pesticide; Proteomics; Biomarker; Aquatics; Hepatotoxicity; Zebrafish; Bioinformatics;
D O I
10.1016/j.dib.2019.104351
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Dieldrin is an environmental contaminant that adversely affects aquatic organisms. The data presented in this study are proteomic data collected in liver of zebrafish that were exposed to the pesticide in a dietary exposure. For label free proteomics, data were collected with a quadrupole Time-of-Flight mass spectrometer and for iTRAQ proteomics, data were acquired using a hybrid quadrupole Orbitrap (Q Exactive) MS system. Using formic acid digestion and label free proteomics, 2,061 proteins were identified, and among those, 103 were differentially abundant (p < 0.05 in at least one dose). In addition, iTRAQ proteomics identified 722 proteins in the liver of zebrafish following dieldrin treatment. The label-free approach identified 21 proteins that followed a dose dependent response. Of the differentially abundant proteins identified by iTRAQ, there were 26 unique expression patterns for proteins based on the three doses of dieldrin. Proteins were queried for disease networks to learn more about adverse effects in the liver following dieldrin exposure. Differentially abundant proteins were related to metabolic disease, steatohepatitis and lipid metabolism disorders, drug-induced liver injury, neoplasms, tissue degeneration and liver metastasis. The proteomics data described here is associated with a research article, "Label-free and iTRAQ proteomics analysis in the liver of zebrafish (Danio rerio) following a dietary exposure to the organochlorine pesticide dieldrin" (Simmons et al. 2019). This investigation reveals new biomarkers of toxicity and will be of interest to those studying aquatic toxicology and pesticides. (c) 2019 The Authors. Published by Elsevier Inc. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
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页数:10
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