Interrogation of small RNA-seq data for small noncoding RNA in human colon cancer

被引:0
|
作者
Koduru, Srinivas V.
Nyinawabera, Angelique
Ravnic, Dino J.
Tiwari, Amit K.
机构
关键词
D O I
10.1158/1538-7445.AM2017-3490
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
3490
引用
收藏
页数:2
相关论文
共 50 条
  • [1] Analysis of small RNA-seq data for differential expression of small noncoding RNAs in human colorectal cancer
    Koduru, Srinivas V.
    Tiwari, Amit K.
    Hazard, Sprague W.
    Mahajan, Milind K.
    Ravnic, Dino J.
    CANCER RESEARCH, 2017, 77
  • [2] Deep annotation of long noncoding RNAs by assembling RNA-seq and small RNA-seq data
    Zhang, Jiaming
    Hou, Weibo
    Zhao, Qi
    Xiao, Songling
    Linghu, Hongye
    Zhang, Lixin
    Du, Jiawei
    Cui, Hongdi
    Yang, Xu
    Ling, Shukuan
    Su, Jianzhong
    Kong, Qingran
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2023, 299 (09)
  • [3] Noncoding RNA distribution in clear cell renal cell cancer: small RNA-seq data
    Koduru, Srinivas V.
    Ravnic, Dino J.
    CANCER RESEARCH, 2017, 77
  • [4] RNA-Seq SSRs and small RNA-Seq SSRs: New approaches in cancer biomarker discovery
    Alisoltani, Arghavan
    Fallahi, Hossein
    Shiran, Behrouz
    Alisoltani, Anousheh
    Ebrahimie, Esmaeil
    GENE, 2015, 560 (01) : 34 - 43
  • [5] sRNAflow: A Tool for the Analysis of Small RNA-Seq Data
    Zayakin, Pawel
    NON-CODING RNA, 2024, 10 (01)
  • [6] shortran: a pipeline for small RNA-seq data analysis
    Gupta, Vikas
    Markmann, Katharina
    Pedersen, Christian N. S.
    Stougaard, Jens
    Andersen, Stig U.
    BIOINFORMATICS, 2012, 28 (20) : 2698 - 2700
  • [7] Novel small RNA spike-in oligonucleotides enable absolute normalization of small RNA-Seq data
    Stefan Lutzmayer
    Balaji Enugutti
    Michael D. Nodine
    Scientific Reports, 7
  • [8] Novel small RNA spike-in oligonucleotides enable absolute normalization of small RNA-Seq data
    Lutzmayer, Stefan
    Enugutti, Balaji
    Nodine, Michael D.
    SCIENTIFIC REPORTS, 2017, 7
  • [9] RNA-Seq profiling of circular RNAs in human small cell lung cancer
    Zhang, Chenxi
    Zhang, Bin
    Yuan, Baiyin
    Chen, Caiping
    Zhou, Ying
    Zhang, Yu
    Sheng, Zhihong
    Sun, Nan
    Wu, Xiaoyuan
    EPIGENOMICS, 2020, 12 (08) : 685 - 700
  • [10] COMPSRA: a COMprehensive Platform for Small RNA-Seq data Analysis
    Jiang Li
    Alvin T. Kho
    Robert P. Chase
    Lorena Pantano
    Leanna Farnam
    Sami S. Amr
    Kelan G. Tantisira
    Scientific Reports, 10