Characterization of truncated endo-β-1,4-glucanases from a compost metagenomic library and their saccharification potentials

被引:13
|
作者
Lee, Jae Pil [1 ]
Lee, Hyun Woo [1 ]
Na, Han Beur [2 ]
Lee, Jun-Hee [2 ]
Hong, Yeo-Jin [2 ]
Jeon, Jeong-Min [2 ]
Kwon, Eun Ju [2 ]
Kim, Sung Kyum [2 ]
Kim, Hoon [1 ,2 ]
机构
[1] Sunchon Natl Univ, Res Inst Life Pharmaceut Sci, Dept Pharm, Sunchon 57922, South Korea
[2] Sunchon Natl Univ, Dept Agr Chem, Sunchon 57922, South Korea
基金
新加坡国家研究基金会;
关键词
Compost metagenome; GH6; endoglucanase; Truncated enzymes; Saccharification; BROAD SUBSTRATE-SPECIFICITY; PAENIBACILLUS SP X4; GH6; CELLOBIOHYDROLASE; ENZYMATIC SACCHARIFICATION; UNCULTURED MICROORGANISMS; STABLE ENDOGLUCANASE; TRICHODERMA-REESEI; MOLECULAR-CLONING; RIBOSOMAL-RNA; ACTIVE-SITE;
D O I
10.1016/j.ijbiomac.2018.04.102
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A gene encoding an endo-beta-1,4-glucanase (Cel6H-f481) was cloned from a compost metagenomic library. The gene, cel6H-f481, was composed of 1446 bp to encode a fused protein of 481 amino acid residues (50,429 Da), i.e., 445 residues (CeI6H-445) from the metagenome, and 36 residues from the pUC19 vector at N-terminus. Cel6H-445 belonged to glycosyl hydrolase (GH) family 6 and showed 71% identity with Actinotalea fermentans endoglucanase with low coverage. Several active bands of truncated forms were observed by activity staining of the crude extract. Major truncated enzymes of 35 (Cel6H-p35) and 23 kDa (Cel6H-p23) were separated by HiTrap Q chromatography. The two enzymes had the same optimum temperature (50 degrees C) and pH (5.5), but Cel6H-p35 was more thermostable than Cel6H-p23 and other GH6 endoglucanases reported. Both enzymes efficiently hydrolyzed carboxymethyl-cellulose (CMC) and barley beta-glucan, but hardly hydrolyzed other substrates tested. The V-max of Cel6H-p35 for CMC was 1.4 times greater than that of Cel6H-p23. The addition of the crude enzymes to a commercial enzyme set increased the saccharification of pretreated rice straw powder by up to 30.9%. These results suggest the N-terminal region of Cel6H-p35 contributes to thermostability and specific activity, and that the enzymes might be a useful additive for saccharification. (C) 2018 Elsevier B.V. All rights reserved.
引用
收藏
页码:554 / 562
页数:9
相关论文
共 50 条
  • [1] A Novel Subfamily of Endo-β-1,4-Glucanases in Glycoside Hydrolase Family 10
    Zhao, Fang
    Cao, Hai-Yan
    Zhao, Long-Sheng
    Zhang, Yi
    Li, Chun-Yang
    Zhang, Yu-Zhong
    Li, Ping-Yi
    Wang, Peng
    Chen, Xiu-Lan
    APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2019, 85 (18)
  • [2] Endo-β-1,4-glucanases impact plant cell wall development by influencing cellulose crystallization
    Magdalena Glass
    Sarah Barkwill
    Faride Unda
    Shawn D.Mansfield
    Journal of Integrative Plant Biology, 2015, 57 (04) : 396 - 410
  • [3] Identification and characterization of a novel endo-β-1,4-glucanase from a soil metagenomic library
    Chai, Shumao
    Zhang, Xueliang
    Gao, Yuejiao
    Nie, Lishuang
    Xiang, Chenchen
    Cao, Mingming
    Wang, Shaochen
    Feng, Zhiyang
    CARBOHYDRATE RESEARCH, 2021, 510
  • [4] Endo-β-1,4-glucanases impact plant cell wall development by influencing cellulose crystallization
    Glass, Magdalena
    Barkwill, Sarah
    Unda, Faride
    Mansfield, Shawn D.
    JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2015, 57 (04) : 396 - 410
  • [5] Cloning and expression of two genes coding endo-β-1,4-glucanases from Trichoderma asperellum PQ34 in Pichia pastoris
    Nguyen Hoang Loc
    Le My Tieu Ngoc
    Hoang Tan Quang
    Nguyen Duc Huy
    Nguyen Ngoc Luong
    CHEMICAL PAPERS, 2016, 70 (03) : 284 - 293
  • [6] Expression and characterization of two secreted His6-tagged endo-β-1,4-glucanases from the mollusc Ampullaria crossean in Pichia pastoris
    Guo, Rui
    Ding, Ming
    Zhang, Siliang
    Xu, Genjun
    Zhao, Fukun
    ACTA BIOCHIMICA ET BIOPHYSICA SINICA, 2008, 40 (05) : 419 - 425
  • [7] Cloning and functional characterization of a novel endo-β-1,4-glucanase gene from a soil-derived metagenomic library
    Liu, Juan
    Liu, Wei-dong
    Zhao, Xiao-li
    Shen, Wen-jing
    Cao, Hui
    Cui, Zhong-li
    APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2011, 89 (04) : 1083 - 1092
  • [8] Functional diversity for biomass deconstruction in family 5 subfamily 5 (GH5_5) of fungal endo-β1,4-glucanases
    Li, Bingyao
    Walton, Jonathan D.
    APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2017, 101 (10) : 4093 - 4101
  • [9] Predominant secretion of cellobiohydrolases and endo-β-1,4-glucanases in nutrient-limited medium by Aspergillus spp. isolated from subtropical field
    Kyu, May Thin
    Nishio, Shunsuke
    Noda, Koki
    Dar, Bay
    Aye, San San
    Matsuda, Tsukasa
    JOURNAL OF BIOCHEMISTRY, 2020, 168 (03) : 243 - 256
  • [10] Characterization of a Multimodular Endo-β-1,4-Glucanase (Cel9K) from Paenibacillus sp X4 with a Potential Additive for Saccharification
    Lee, Jae Pil
    Kim, Yoon A.
    Kim, Sung Kyum
    Kim, Hoon
    JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY, 2018, 28 (04) : 588 - 596