The Evolving Role of Next-Generation Sequencing in Screening and Diagnosis of Hemoglobinopathies

被引:28
作者
Achour, Ahlem [1 ,2 ]
Koopmann, Tamara T. [1 ]
Baas, Frank [1 ]
Harteveld, Cornelis L. [1 ]
机构
[1] Leiden Univ, Med Ctr, Dept Clin Genet LDGA, Leiden, Netherlands
[2] Charles Nicolle Hosp, Dept Congenital & Hereditary Dis, Tunis, Tunisia
关键词
NGS; WES; WGS; beta-thalassemia; sickle cell disease; alpha-thalassemia; hemoglobinopathy diagnostics; NONINVASIVE PRENATAL-DIAGNOSIS; BETA-THALASSEMIA; POPULATION; GUIDELINES;
D O I
10.3389/fphys.2021.686689
中图分类号
Q4 [生理学];
学科分类号
071003 ;
摘要
During the last few years, next-generation sequencing (NGS) has undergone a rapid transition from a research setting to a clinical application, becoming the method of choice in many clinical genetics laboratories for the detection of disease-causing variants in a variety of genetic diseases involving multiple genes. The hemoglobinopathies are the most frequently found Mendelian inherited monogenic disease worldwide and are composed of a complex group of disorders frequently involving the inheritance of more than one abnormal gene. This review aims to present the role of NGS in both screening and pre- and post-natal diagnostics of the hemoglobinopathies, and the added value of NGS is discussed based on the results described in the literature. Overall, NGS has an added value in large-scale high throughput carrier screening and in the complex cases for which common molecular techniques have some inadequacies. It is proven that the majority of thalassemia cases and Hb variants can be diagnosed using routine analysis involving a combined approach of hematology, hemoglobin separation, and classical DNA methods; however, we conclude that NGS can be a useful addition to the existing methods in the diagnosis of these disorders.
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页数:6
相关论文
共 35 条
[1]   A new gene associated with a β-thalassemia phenotype: the observation of variants in SUPT5H [J].
Achour, Ahlem ;
Koopmann, Tamara ;
Castel, Rob ;
Santen, Gijs W. E. ;
den Hollander, Nicolette ;
Knijnenburg, Jeroen ;
Ruivenkamp, Claudia A. L. ;
Arkesteijn, Sandra G. J. ;
ter Huurne, Jeanet ;
Bisoen, Sharda ;
Verschuren, Maaike ;
Vijfhuizen, Linda ;
Schaap, Rianne ;
Grimbergen, Anneliese ;
Slomp, Jennichjen ;
Traeger-Synodinos, Joanne ;
Vrettou, Christina ;
Pissard, Serge ;
Galacteros, Frederic ;
Baas, Frank ;
Harteveld, Cornelis L. .
BLOOD, 2020, 136 (15) :1789-1793
[2]   ATR-16 syndrome: mechanisms linking monosomy to phenotype [J].
Babbs, Christian ;
Brown, Jill ;
Horsley, Sharon W. ;
Slater, Joanne ;
Maifoshie, Evie ;
Kumar, Shiwangini ;
Ooijevaar, Paul ;
Kriek, Marjolein ;
Dixon-McIver, Amanda ;
Harteveld, Cornelis L. ;
Traeger-Synodinos, Jan ;
Wilkie, Andrew O. M. ;
Higgs, Douglas R. ;
Buckle, Veronica J. .
JOURNAL OF MEDICAL GENETICS, 2020, 57 (06) :414-421
[3]  
Bharadwaj Rishab, 2020, Int J Hematol Oncol Stem Cell Res, V14, P177, DOI 10.18502/ijhoscr.v14i3.3726
[4]  
Christianson A., 2006, March of Dimes: Global Report on Birth Defects, the Hidden Toll of Dying and Disabled Children
[5]   Molecular basis of α-thalassemia [J].
Farashi, Samaneh ;
Harteveld, Cornelis L. .
BLOOD CELLS MOLECULES AND DISEASES, 2018, 70 :43-53
[6]   Prospective and retrospective primary prevention of Hemoglobinopathies in multiethnic societies [J].
Giordano, Piero C. .
CLINICAL BIOCHEMISTRY, 2009, 42 (18) :1757-1766
[7]   Diagnosis of haemoglobinopathies: New scientific advances [J].
Harteveld, Cornelis L. .
THALASSEMIA REPORTS, 2018, 8 (01) :7-8
[8]   α-thalassaemia [J].
Harteveld, Cornelis L. ;
Higgs, Douglas R. .
ORPHANET JOURNAL OF RARE DISEASES, 2010, 5
[9]   Next-generation sequencing improves thalassemia carrier screening among premarital adults in a high prevalence population: the Dai nationality, China [J].
He, Jing ;
Song, Wenhui ;
Yang, Jinlong ;
Lu, Sen ;
Yuan, Yuan ;
Guo, Junfu ;
Zhang, Jie ;
Ye, Kai ;
Yang, Fan ;
Long, Fangfang ;
Peng, Zhiyu ;
Yu, Haijing ;
Cheng, Le ;
Zhu, Baosheng .
GENETICS IN MEDICINE, 2017, 19 (09) :1022-1031
[10]   Guidelines for Validation of Next-Generation Sequencing-Based Oncology Panels A Joint Consensus Recommendation of the Association for Molecular Pathology and College of American Pathologists [J].
Jennings, Lawrence J. ;
Arcila, Maria E. ;
Corless, Christopher ;
Kamel-Reid, Suzanne ;
Lubin, Ira M. ;
Pfeifer, John ;
Temple-Smolkin, Robyn L. ;
Voelkerding, Karl V. ;
Nikiforova, Marina N. .
JOURNAL OF MOLECULAR DIAGNOSTICS, 2017, 19 (03) :341-365