Actinopolyspora salinaria sp nov., a halophilic actinomycete isolated from solar saltern soil

被引:9
作者
Duangmal, Kannika [1 ,2 ]
Suksaard, Paweena [1 ]
Pathom-aree, Wasu [3 ]
Mingma, Ratchanee [4 ]
Matsumoto, Atsuko [4 ]
Takahashi, Yoko [4 ]
机构
[1] Kasetsart Univ, Dept Microbiol, Fac Sci, Bangkok 10900, Thailand
[2] Kasetsart Univ, NRU KU, Ctr Adv Studies Trop Nat Resources, Bangkok 10900, Thailand
[3] Chiang Mai Univ, Fac Sci, Dept Biol, Chiang Mai 50200, Thailand
[4] Kitasato Univ, Kitasato Inst Life Sci, Minato Ku, 5-9-1 Shirokane, Tokyo 1088641, Japan
关键词
IDENTIFICATION; NOCARDIA; CLASSIFICATION; STRAINS;
D O I
10.1099/ijsem.0.000926
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The taxonomic position of the halophilic actinobacterial strain, HS05-03(T), isolated from solar saltern soil, was determined using a polyphasic approach. Phylogenetic analysis based on the 16S rRNA gene sequence of the strain showed that it formed a distinct evolutionary lineage in the genus Actinopolyspora. The organism was most closely related to the type strains of the species Actinopolyspora xinjiangensis (98.0 % similarity), Actinopolyspora righensis (97.9 % similarity), Actinopolyspora lacussalsi (97.9 % similarity) and Actinopolyspora erythraea (97.8 % similarity). The whole-organism hydrolysates contained meso-diaminopimelic acid, arabinose, galactose and ribose. The predominant menaquinones were found to be MK-9(H-4) and MK-10(H-4). The acyl type of the peptidoglycan was N-acetyl. The diagnostic phospholipid detected was phosphatidylcholine. The predominant cellular fatty acids were iso-C-16 : 0, anteiso-C-17 : 0 and iso-C-15 : 0. The G+C content of the genomic DNA was 69.9 mol%. DNA-DNA hybridization values between strain HS05-03(T) and the type strains of the most closely related species were below the 70 % threshold. On the basis of the phenotypic and genotypic data, it is proposed that strain HS05-03(T) represents a novel species of the genus Actinopolyspora, with the name Actinopolyspora salinaria sp. nov. The type strain is HS05-03(T) (=BCC 51286(T) =NBRC 109078(T)).
引用
收藏
页码:1660 / 1665
页数:6
相关论文
共 36 条
[31]   Actinopolyspora alba sp nov and Actinopolyspora erythraea sp nov., isolated from a salt field, and reclassification of Actinopolyspora iraqiensis Ruan et al. 1994 as a heterotypic synonym of Saccharomonospora halophila [J].
Tang, Shu-Kun ;
Wang, Yun ;
Klenk, Hans-Peter ;
Shi, Rong ;
Lou, Kai ;
Zhang, Yun-Jiao ;
Chen, Chao ;
Ruan, Ji-Sheng ;
Li, Wen-Jun .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2011, 61 :1693-1698
[32]   MYCOLIC ACID COMPOSITION AND THERMALLY ADAPTATIVE CHANGES IN NOCARDIA-ASTEROIDES [J].
TOMIYASU, I .
JOURNAL OF BACTERIOLOGY, 1982, 151 (02) :828-837
[33]   AN IMPROVED METHOD FOR THE GLYCOLATE TEST FOR SIMPLE IDENTIFICATION OF THE ACYL TYPE OF BACTERIAL-CELL WALLS [J].
UCHIDA, K ;
AIDA, K .
JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY, 1984, 30 (02) :131-134
[34]   REPORT OF THE AD-HOC-COMMITTEE ON RECONCILIATION OF APPROACHES TO BACTERIAL SYSTEMATICS [J].
WAYNE, LG ;
BRENNER, DJ ;
COLWELL, RR ;
GRIMONT, PAD ;
KANDLER, O ;
KRICHEVSKY, MI ;
MOORE, LH ;
MOORE, WEC ;
MURRAY, RGE ;
STACKEBRANDT, E ;
STARR, MP ;
TRUPER, HG .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1987, 37 (04) :463-464
[35]  
WILLIAMS ST, 1983, J GEN MICROBIOL, V129, P1743
[36]   An update of the structure and 16S rRNA gene sequence-based definition of higher ranks of the class Actinobacteria, with the proposal of two new suborders and four new families and emended descriptions of the existing higher taxa [J].
Zhi, Xiao-Yang ;
Li, Wen-Jun ;
Stackebrandt, Erko .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2009, 59 :589-608