A Machine Learning Approach Yields a Multiparameter Prognostic Marker in Liver Cancer
被引:16
作者:
Liu, Xiaoli
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机构:
Capital Med Univ, Ctr Integrat Med, Beijing Ditan Hosp, Beijing 100015, Peoples R ChinaCapital Med Univ, Ctr Integrat Med, Beijing Ditan Hosp, Beijing 100015, Peoples R China
Liu, Xiaoli
[1
]
Lu, Jilin
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机构:
Fudan Univ, Huashan Hosp, Dept Gen Surg, Shanghai, Peoples R ChinaCapital Med Univ, Ctr Integrat Med, Beijing Ditan Hosp, Beijing 100015, Peoples R China
Lu, Jilin
[2
]
Zhang, Guanxiong
论文数: 0引用数: 0
h-index: 0
机构:
Genecast Precis Med Technol Inst, Beijing, Peoples R ChinaCapital Med Univ, Ctr Integrat Med, Beijing Ditan Hosp, Beijing 100015, Peoples R China
Zhang, Guanxiong
[3
]
Han, Junyan
论文数: 0引用数: 0
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机构:
Capital Med Univ, Beijing Ditan Hosp, Inst Infect Dis, Beijing 100015, Peoples R ChinaCapital Med Univ, Ctr Integrat Med, Beijing Ditan Hosp, Beijing 100015, Peoples R China
Han, Junyan
[4
]
Zhou, Wei
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h-index: 0
机构:
Genecast Precis Med Technol Inst, Beijing, Peoples R ChinaCapital Med Univ, Ctr Integrat Med, Beijing Ditan Hosp, Beijing 100015, Peoples R China
Zhou, Wei
[3
]
Chen, Huan
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机构:
Genecast Precis Med Technol Inst, Beijing, Peoples R ChinaCapital Med Univ, Ctr Integrat Med, Beijing Ditan Hosp, Beijing 100015, Peoples R China
Chen, Huan
[3
]
Zhang, Henghui
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机构:
Capital Med Univ, Beijing Ditan Hosp, Inst Infect Dis, Beijing 100015, Peoples R ChinaCapital Med Univ, Ctr Integrat Med, Beijing Ditan Hosp, Beijing 100015, Peoples R China
Zhang, Henghui
[4
]
Yang, Zhiyun
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Capital Med Univ, Ctr Integrat Med, Beijing Ditan Hosp, Beijing 100015, Peoples R ChinaCapital Med Univ, Ctr Integrat Med, Beijing Ditan Hosp, Beijing 100015, Peoples R China
Yang, Zhiyun
[1
]
机构:
[1] Capital Med Univ, Ctr Integrat Med, Beijing Ditan Hosp, Beijing 100015, Peoples R China
[2] Fudan Univ, Huashan Hosp, Dept Gen Surg, Shanghai, Peoples R China
[3] Genecast Precis Med Technol Inst, Beijing, Peoples R China
[4] Capital Med Univ, Beijing Ditan Hosp, Inst Infect Dis, Beijing 100015, Peoples R China
A number of staging systems have been developed to predict clinical outcomes in hepatocellular carcinoma (HCC). However, no general consensus has been reached regarding the optimal model. New approaches such as machine learning (ML) strategies are powerful tools for incorporating risk factors from multiple platforms. We retrospectively reviewed the baseline information, including clinicopathologic characteristics, laboratory parameters, and peripheral immune features reflecting T-cell function, from three HCC cohorts. A gradient-boosting survival (GBS) classifier was trained with prognosis-related variables in the training dataset and validated in two independent cohorts. We constructed a 20-eature GBS model classifier incorporating one clinical feature, 14 laboratory parameters, and five T-cell function parameters obtained from peripheral blood mononuclear cells. The GBS model-derived risk scores demonstrated high concordance indexes (C-indexes): 0.844, 0.827, and 0.806 in the training set and validation sets 1 and 2, respectively. The GBS classifier could separate patients into high-, medium- and low-risk subgroups with respect to death in all datasets (P < 0.05 for all comparisons). A higher risk score was positively correlated with a higher clinical stage and the presence of portal vein tumor thrombus (PVTT). Subgroup analyses with respect to Child-Pugh class, Barcelona Clinic Liver Cancer stage, and PVTT status supported the prognostic relevance of the GBS-erived risk algorithm independent of the conventional tumor staging system. In summary, a multiparameter ML algorithm incorporating clinical characteristics, laboratory parameters, and peripheral immune signatures offers a different approach to identify patients with the greatest risk of HCC-related death.
机构:
Univ Washington, Seattle, WA 98195 USA
Seattle Canc Care Alliance, Fred Hutchinson Canc Res Ctr, Seattle, WA USASidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
Tykodi, Scott S.
;
Chow, Laura Q. M.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Seattle, WA 98195 USA
Seattle Canc Care Alliance, Fred Hutchinson Canc Res Ctr, Seattle, WA USASidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
Chow, Laura Q. M.
;
Hwu, Wen-Jen
论文数: 0引用数: 0
h-index: 0
机构:
Univ Texas MD Anderson Canc Ctr, Houston, TX 77030 USASidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
机构:
St Lukes Episcopal Hosp, Ctr Canc, Houston, TX 77030 USASidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
Camacho, Luis H.
;
Kauh, John
论文数: 0引用数: 0
h-index: 0
机构:
Emory Univ, Winship Canc Inst, Atlanta, GA 30322 USASidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
Kauh, John
;
Odunsi, Kunle
论文数: 0引用数: 0
h-index: 0
机构:
Roswell Pk Canc Inst, Buffalo, NY 14263 USASidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
Odunsi, Kunle
;
Pitot, Henry C.
论文数: 0引用数: 0
h-index: 0
机构:
Mayo Clin, Coll Med, Rochester, MN USASidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
Pitot, Henry C.
;
Hamid, Omid
论文数: 0引用数: 0
h-index: 0
机构:
Angeles Clin, Santa Monica, CA USASidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
Hamid, Omid
;
论文数: 引用数:
h-index:
机构:
Bhatia, Shailender
;
Martins, Renato
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Seattle, WA 98195 USA
Seattle Canc Care Alliance, Fred Hutchinson Canc Res Ctr, Seattle, WA USASidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
Martins, Renato
;
Eaton, Keith
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Seattle, WA 98195 USA
Seattle Canc Care Alliance, Fred Hutchinson Canc Res Ctr, Seattle, WA USASidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
机构:
Univ Hawaii, Canc Ctr, Program Epidemiol, Honolulu, HI 96822 USAUniv Hawaii, Canc Ctr, Program Epidemiol, Honolulu, HI 96822 USA
Chaudharyl, Kumardeep
;
Poirionl, Olivier B.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Hawaii, Canc Ctr, Program Epidemiol, Honolulu, HI 96822 USAUniv Hawaii, Canc Ctr, Program Epidemiol, Honolulu, HI 96822 USA
Poirionl, Olivier B.
;
Lu, Liangqun
论文数: 0引用数: 0
h-index: 0
机构:
Univ Hawaii, Canc Ctr, Program Epidemiol, Honolulu, HI 96822 USA
Univ Hawaii Manoa, Mol Biosci & Bioengn Grad Program, Honolulu, HI 96822 USAUniv Hawaii, Canc Ctr, Program Epidemiol, Honolulu, HI 96822 USA
Lu, Liangqun
;
Garmire, Lana X.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Hawaii, Canc Ctr, Program Epidemiol, Honolulu, HI 96822 USA
Univ Hawaii Manoa, Mol Biosci & Bioengn Grad Program, Honolulu, HI 96822 USAUniv Hawaii, Canc Ctr, Program Epidemiol, Honolulu, HI 96822 USA
机构:
Univ Pretoria, Fac Hlth Sci, Pan African Canc Res Inst PACRI, SAMRC UP Precis Prevent & Novel Drug Targets HIV, ZA-0028 Hatfield, South AfricaUniv Pretoria, Fac Hlth Sci, Pan African Canc Res Inst PACRI, SAMRC UP Precis Prevent & Novel Drug Targets HIV, ZA-0028 Hatfield, South Africa
Dlamini, Zodwa
;
Francies, Flavia Zita
论文数: 0引用数: 0
h-index: 0
机构:
Univ Pretoria, Fac Hlth Sci, Pan African Canc Res Inst PACRI, SAMRC UP Precis Prevent & Novel Drug Targets HIV, ZA-0028 Hatfield, South AfricaUniv Pretoria, Fac Hlth Sci, Pan African Canc Res Inst PACRI, SAMRC UP Precis Prevent & Novel Drug Targets HIV, ZA-0028 Hatfield, South Africa
Francies, Flavia Zita
;
Hull, Rodney
论文数: 0引用数: 0
h-index: 0
机构:
Univ Pretoria, Fac Hlth Sci, Pan African Canc Res Inst PACRI, SAMRC UP Precis Prevent & Novel Drug Targets HIV, ZA-0028 Hatfield, South AfricaUniv Pretoria, Fac Hlth Sci, Pan African Canc Res Inst PACRI, SAMRC UP Precis Prevent & Novel Drug Targets HIV, ZA-0028 Hatfield, South Africa
Hull, Rodney
;
Marima, Rahaba
论文数: 0引用数: 0
h-index: 0
机构:
Univ Pretoria, Fac Hlth Sci, Pan African Canc Res Inst PACRI, SAMRC UP Precis Prevent & Novel Drug Targets HIV, ZA-0028 Hatfield, South AfricaUniv Pretoria, Fac Hlth Sci, Pan African Canc Res Inst PACRI, SAMRC UP Precis Prevent & Novel Drug Targets HIV, ZA-0028 Hatfield, South Africa
机构:
Univ Washington, Seattle, WA 98195 USA
Seattle Canc Care Alliance, Fred Hutchinson Canc Res Ctr, Seattle, WA USASidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
Tykodi, Scott S.
;
Chow, Laura Q. M.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Seattle, WA 98195 USA
Seattle Canc Care Alliance, Fred Hutchinson Canc Res Ctr, Seattle, WA USASidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
Chow, Laura Q. M.
;
Hwu, Wen-Jen
论文数: 0引用数: 0
h-index: 0
机构:
Univ Texas MD Anderson Canc Ctr, Houston, TX 77030 USASidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
机构:
St Lukes Episcopal Hosp, Ctr Canc, Houston, TX 77030 USASidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
Camacho, Luis H.
;
Kauh, John
论文数: 0引用数: 0
h-index: 0
机构:
Emory Univ, Winship Canc Inst, Atlanta, GA 30322 USASidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
Kauh, John
;
Odunsi, Kunle
论文数: 0引用数: 0
h-index: 0
机构:
Roswell Pk Canc Inst, Buffalo, NY 14263 USASidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
Odunsi, Kunle
;
Pitot, Henry C.
论文数: 0引用数: 0
h-index: 0
机构:
Mayo Clin, Coll Med, Rochester, MN USASidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
Pitot, Henry C.
;
Hamid, Omid
论文数: 0引用数: 0
h-index: 0
机构:
Angeles Clin, Santa Monica, CA USASidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
Hamid, Omid
;
论文数: 引用数:
h-index:
机构:
Bhatia, Shailender
;
Martins, Renato
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Seattle, WA 98195 USA
Seattle Canc Care Alliance, Fred Hutchinson Canc Res Ctr, Seattle, WA USASidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
Martins, Renato
;
Eaton, Keith
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Seattle, WA 98195 USA
Seattle Canc Care Alliance, Fred Hutchinson Canc Res Ctr, Seattle, WA USASidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21231 USA
机构:
Univ Hawaii, Canc Ctr, Program Epidemiol, Honolulu, HI 96822 USAUniv Hawaii, Canc Ctr, Program Epidemiol, Honolulu, HI 96822 USA
Chaudharyl, Kumardeep
;
Poirionl, Olivier B.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Hawaii, Canc Ctr, Program Epidemiol, Honolulu, HI 96822 USAUniv Hawaii, Canc Ctr, Program Epidemiol, Honolulu, HI 96822 USA
Poirionl, Olivier B.
;
Lu, Liangqun
论文数: 0引用数: 0
h-index: 0
机构:
Univ Hawaii, Canc Ctr, Program Epidemiol, Honolulu, HI 96822 USA
Univ Hawaii Manoa, Mol Biosci & Bioengn Grad Program, Honolulu, HI 96822 USAUniv Hawaii, Canc Ctr, Program Epidemiol, Honolulu, HI 96822 USA
Lu, Liangqun
;
Garmire, Lana X.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Hawaii, Canc Ctr, Program Epidemiol, Honolulu, HI 96822 USA
Univ Hawaii Manoa, Mol Biosci & Bioengn Grad Program, Honolulu, HI 96822 USAUniv Hawaii, Canc Ctr, Program Epidemiol, Honolulu, HI 96822 USA
机构:
Univ Pretoria, Fac Hlth Sci, Pan African Canc Res Inst PACRI, SAMRC UP Precis Prevent & Novel Drug Targets HIV, ZA-0028 Hatfield, South AfricaUniv Pretoria, Fac Hlth Sci, Pan African Canc Res Inst PACRI, SAMRC UP Precis Prevent & Novel Drug Targets HIV, ZA-0028 Hatfield, South Africa
Dlamini, Zodwa
;
Francies, Flavia Zita
论文数: 0引用数: 0
h-index: 0
机构:
Univ Pretoria, Fac Hlth Sci, Pan African Canc Res Inst PACRI, SAMRC UP Precis Prevent & Novel Drug Targets HIV, ZA-0028 Hatfield, South AfricaUniv Pretoria, Fac Hlth Sci, Pan African Canc Res Inst PACRI, SAMRC UP Precis Prevent & Novel Drug Targets HIV, ZA-0028 Hatfield, South Africa
Francies, Flavia Zita
;
Hull, Rodney
论文数: 0引用数: 0
h-index: 0
机构:
Univ Pretoria, Fac Hlth Sci, Pan African Canc Res Inst PACRI, SAMRC UP Precis Prevent & Novel Drug Targets HIV, ZA-0028 Hatfield, South AfricaUniv Pretoria, Fac Hlth Sci, Pan African Canc Res Inst PACRI, SAMRC UP Precis Prevent & Novel Drug Targets HIV, ZA-0028 Hatfield, South Africa
Hull, Rodney
;
Marima, Rahaba
论文数: 0引用数: 0
h-index: 0
机构:
Univ Pretoria, Fac Hlth Sci, Pan African Canc Res Inst PACRI, SAMRC UP Precis Prevent & Novel Drug Targets HIV, ZA-0028 Hatfield, South AfricaUniv Pretoria, Fac Hlth Sci, Pan African Canc Res Inst PACRI, SAMRC UP Precis Prevent & Novel Drug Targets HIV, ZA-0028 Hatfield, South Africa