Characterization of two related Erwinia myoviruses that are distant relatives of the PhiKZ-like Jumbo phages

被引:14
作者
Arens, Daniel K. [1 ]
Brady, T. Scott [1 ]
Carter, John L. [1 ]
Pape, Jenny A. [1 ]
Robinson, David M. [1 ]
Russell, Kerri A. [1 ]
Staley, Lyndsay A. [1 ]
Stettler, Jason M. [2 ]
Tateoka, Olivia B. [1 ]
Townsend, Michelle H. [1 ]
Whitley, Kiara V. [1 ]
Wienclaw, Trevor M. [1 ]
Williamson, Taryn L. [1 ]
Johnson, Steven M. [1 ]
Grose, Julianne H. [1 ]
机构
[1] Brigham Young Univ, Microbiol & Mol Biol Dept, Provo, UT 84602 USA
[2] Brigham Young Univ, Plant & Wildlife Sci Dept, Provo, UT 84602 USA
来源
PLOS ONE | 2018年 / 13卷 / 07期
关键词
COMPARATIVE GENOMIC ANALYSIS; ENORMOUS DIVERSITY; ESCHERICHIA-COLI; APPLE BLOSSOMS; FRUIT-TREES; PSEUDOMONAS; BACTERIOPHAGE; IDENTIFICATION; PROTEIN; EVOLUTION;
D O I
10.1371/journal.pone.0200202
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Bacteriophages are a major force in the evolution of bacteria due to their sheer abundance as well as their ability to infect and kill their hosts and to transfer genetic material. Bacteriophages that infect the Enterobacteriaceae family are of particular interest because this bacterial family contains dangerous animal and plant pathogens. Herein we report the isolation and characterization of two jumbo myovirus Erwinia phages, RisingSun and Joad, collected from apple trees. These two genomes are nearly identical with Joad harboring two additional putative gene products. Despite mass spectrometry data that support the putative annotation, 43% of their gene products have no significant BLASTP hit. These phages are also more closely related to Pseudomonas and Vibrio phages than to published Enterobacteriaceae phages. Of the 140 gene products with a BLASTP hit, 81% and 63% of the closest hits correspond to gene products from Pseudomonas and Vibrio phages, respectively. This relatedness may reflect their ecological niche, rather than the evolutionary history of their host. Despite the presence of over 800 Enterobacteriaceae phages on NCBI, the uniqueness of these two phages highlights the diversity of Enterobacteriaceae phages still to be discovered.
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页数:19
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