Genome-Wide Analysis of the Late Embryogenesis Abundant (LEA) and Abscisic Acid-, Stress-, and Ripening-Induced (ASR) Gene Superfamily from Canavalia rosea and Their Roles in Salinity/Alkaline and Drought Tolerance

被引:27
作者
Lin, Ruoyi [1 ,2 ,3 ,4 ]
Zou, Tao [1 ,2 ,3 ,4 ,5 ]
Mei, Qiming [1 ,2 ,6 ,7 ]
Wang, Zhengfeng [1 ,2 ,6 ,7 ]
Zhang, Mei [1 ,2 ,5 ]
Jian, Shuguang [1 ,2 ,6 ,7 ]
机构
[1] Chinese Acad Sci, South China Bot Garden, Key Lab South China Agr Plant Mol Anal & Genet Im, Guangzhou 510650, Peoples R China
[2] Chinese Acad Sci, South China Bot Garden, Guangdong Prov Key Lab Appl Bot, Guangzhou 510650, Peoples R China
[3] Univ Chinese Acad Sci, Beijing 100039, Peoples R China
[4] Chinese Acad Sci, Core Bot Gardens, Ctr Econ Bot, Guangzhou 510650, Peoples R China
[5] Chinese Acad Sci, South China Bot Garden, CAS Engn Lab Vegetat Ecosyst Restorat Isl & Coast, Guangzhou 510650, Peoples R China
[6] Chinese Acad Sci, Core Bot Gardens, Ctr Plant Ecol, Key Lab Vegetat Restorat & Management Degraded Ec, Guangzhou 510650, Peoples R China
[7] Southern Marine Sci & Engn Guangdong Lab Guangzho, Guangzhou 511458, Peoples R China
关键词
late embryogenesis abundant protein; abscisic acid-; stress-; and ripening-induced protein; salinity; alkaline; drought; Canavalia rosea (Sw; ) DC; FUNCTIONAL INSIGHTS; EXPRESSION ANALYSIS; ESCHERICHIA-COLI; LATE MATURATION; PROTEIN FAMILY; IN-VITRO; IDENTIFICATION; PROTECTION; GRAPEVINE; WHEAT;
D O I
10.3390/ijms22094554
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Canavalia rosea (bay bean), distributing in coastal areas or islands in tropical and subtropical regions, is an extremophile halophyte with good adaptability to seawater and drought. Late embryogenesis abundant (LEA) proteins typically accumulate in response to various abiotic stresses, including dehydration, salinity, high temperature, and cold, or during the late stage of seed development. Abscisic acid-, stress-, and ripening-induced (ASR) genes are stress and developmentally regulated plant-specific genes. In this study, we reported the first comprehensive survey of the LEA and ASR gene superfamily in C. rosea. A total of 84 CrLEAs and three CrASRs were identified in C. rosea and classified into nine groups. All CrLEAs and CrASRs harbored the conserved motif for their family proteins. Our results revealed that the CrLEA genes were widely distributed in different chromosomes, and all of the CrLEA/CrASR genes showed wide expression features in different tissues in C. rosea plants. Additionally, we introduced 10 genes from different groups into yeast to assess the functions of the CrLEAs/CrASRs. These results contribute to our understanding of LEA/ASR genes from halophytes and provide robust candidate genes for functional investigations in plant species adapted to extreme environments.
引用
收藏
页数:26
相关论文
共 56 条
[1]   Structural Plasticity of Intrinsically Disordered LEA Proteins from Xerophyta schlechteri Provides Protection In Vitro and In Vivo [J].
Artur, Mariana A. Silva ;
Rienstra, Juriaan ;
Dennis, Timothy J. ;
Farrant, Jill M. ;
Ligterink, Wilco ;
Hilhorst, Henk .
FRONTIERS IN PLANT SCIENCE, 2019, 10
[2]   Dissecting the Genomic Diversification of Late Embryogenesis Abundant (LEA) Protein Gene Families in Plants [J].
Artur, Mariana Aline Silva ;
Zhao, Tao ;
Ligterink, Wilco ;
Schranz, Eric ;
Hilhorst, Henk W. M. .
GENOME BIOLOGY AND EVOLUTION, 2019, 11 (02) :459-471
[3]   The enigmatic LEA proteins and other hydrophilins [J].
Battaglia, Marina ;
Olvera-Carrillo, Yadira ;
Garciarrubio, Alejandro ;
Campos, Francisco ;
Covarrubias, Alejandra A. .
PLANT PHYSIOLOGY, 2008, 148 (01) :6-24
[4]   Late Embryogenesis Abundant (LEA) proteins in legumes [J].
Battaglia, Marina ;
Covarrubias, Alejandra A. .
FRONTIERS IN PLANT SCIENCE, 2013, 4
[5]   Fast and sensitive protein alignment using DIAMOND [J].
Buchfink, Benjamin ;
Xie, Chao ;
Huson, Daniel H. .
NATURE METHODS, 2015, 12 (01) :59-60
[6]   The Ubiquitous Distribution of Late Embryogenesis Abundant Proteins across Cell Compartments in Arabidopsis Offers Tailored Protection against Abiotic Stress [J].
Candat, Adrien ;
Paszkiewicz, Gael ;
Neveu, Martine ;
Gautier, Romain ;
Logan, David C. ;
Avelange-Macherel, Marie-Helene ;
Macherel, David .
PLANT CELL, 2014, 26 (07) :3148-3166
[7]   Identification and phylogenetic analysis of late embryogenesis abundant proteins family in tomato (Solanum lycopersicum) [J].
Cao, Jun ;
Li, Xiang .
PLANTA, 2015, 241 (03) :757-772
[8]   Heard it through the grapevine? ABA and sugar cross-talk: the ASR story [J].
Carrari, F ;
Fernie, AR ;
Iusem, ND .
TRENDS IN PLANT SCIENCE, 2004, 9 (02) :57-59
[9]   Temporal profiling of the heat-stable proteome during late maturation of Medicago truncatula seeds identifies a restricted subset of late embryogenesis abundant proteins associated with longevity [J].
Chatelain, Emilie ;
Hundertmark, Michaela ;
Leprince, Olivier ;
Le Gall, Sophie ;
Satour, Pascale ;
Deligny-Penninck, Stephanie ;
Rogniaux, Helene ;
Buitink, Julia .
PLANT CELL AND ENVIRONMENT, 2012, 35 (08) :1440-1455
[10]   TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological Data [J].
Chen, Chengjie ;
Chen, Hao ;
Zhang, Yi ;
Thomas, Hannah R. ;
Frank, Margaret H. ;
He, Yehua ;
Xia, Rui .
MOLECULAR PLANT, 2020, 13 (08) :1194-1202