Crystal structure, Hirshfeld surface analysis and PIXEL calculations of a 1:1 epimeric mixture of 3-[(4-nitronenzyiiciene)amino]-2(R,S)-(4-nitrophenyl)-5(S)-(propan-2-yl)imidazolidin-4-one

被引:0
作者
Gomes, Ligia R. [1 ,2 ]
Low, John Nicolson [3 ]
Wardell, James L. [3 ,4 ]
de Souza, Marcus V. N. [4 ]
da Costa, Cristiane F. [4 ]
机构
[1] Univ Porto, Fac Ciencias, Dept Quim & Bioquim, REQUIMTE, Rua Campo Alegre 687, P-4169007 Porto, Portugal
[2] UFP, Escola Super Saude, FP ENAS Fac Ciencias Saude, Rua Carlos da Maia 296, P-4200150 Porto, Portugal
[3] Univ Aberdeen, Dept Chem, Old Aberdeen AB24 3UE, Scotland
[4] Fundacao Oswaldo Cruz, Inst Tecnol Farmacos Farmanguinhos, BR-21041250 Rio De Janeiro, RJ, Brazil
关键词
crystal structure; Hirshfeld surface analysis; PIXEL calculations; epimeric mixture; IMIDAZOLIDIN-4-ONE; DERIVATIVES; PRIMAQUINE; DESIGN;
D O I
10.1107/S2056989019013938
中图分类号
O7 [晶体学];
学科分类号
0702 ; 070205 ; 0703 ; 080501 ;
摘要
A 1:1 epimeric mixture of 3-[(4-nitrobenzylidene)amino]-2(R,S)-(4-nitropheny1)-5(S)-(propan-2-yl)imidazolidin-4-one, C19H19N5O5, was isolated from a reaction mixture of 2(S)-amino-3-methyl-1-oxobutanehydrazine and 4-nitrobenzaldehyde in ethanol. The product was derived from an initial reaction of 2(S)-amino3-methyl-l-oxobutanehydrazine at its hydrazine group to provide a 4-nitrobenzylidene derivative, followed by a cyclization reaction with another molecule of 4-nitrobenzaldehyde to form the chiral five-membered imidazolidin-4-one ring. The formation of the five-membered imidazolidin-4-one ring occurred with retention of the configuration at the 5-position, but with racemization at the 2-position. In the crystal, N -H center dot center dot center dot O(nitro) hydrogen bonds, weak C- H center dot center dot center dot O(carbonyl) and C -H center dot center dot center dot O(nitro) hydrogen bonds, as well as C- H center dot center dot center dot pi, N - H center dot center dot center dot pi and pi-pi interactions, are present. These combine to generate a three-dimensional array. Hirshfeld surface analysis and PIXEL calculations are also reported.
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页码:1774 / +
页数:19
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