Evaluation of anti-EGFR potential of quinazoline derivatives using molecular docking: An in silico approach

被引:11
作者
Tanveer, Fariha [1 ]
Anwar, Muhammad Faraz [1 ,2 ]
Siraj, Bushra [1 ]
Zarina, Shamshad [1 ,3 ]
机构
[1] Univ Karachi, Dr Zafar H Zaidi Ctr Prote, Karachi, Pakistan
[2] Bahria Univ Med & Dent Coll, Dept Biochem, Karachi, Pakistan
[3] Liaquat Natl Med Coll, Stadium Rd, Karachi 74800, Pakistan
关键词
binding free energies; molecular target; oral epithelial malignancy; scoring function; tyrosine kinase inhibitors; SQUAMOUS-CELL CARCINOMA; TYROSINE KINASE; AUTODOCK VINA; ORAL-CANCER; BETEL QUID; RECEPTOR; INHIBITOR; DACOMITINIB; EXPRESSION; AFATINIB;
D O I
10.1002/bab.2199
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Overexpression of epidermal growth factor receptor (EGFR) is commonly reported in epithelial malignancies such as oral squamous cell carcinoma. Inhibition of EGFR is, therefore, considered a potential therapeutic strategy. Among various anti-EGFR drugs, quinazoline-based tyrosine kinase inhibitors (TKIs) have gained increasing attention. Present study focused to investigate anti-EGFR potential of quinazoline-based compounds using in silico approach. Two widely used docking programs GOLD and AutoDock Vina were used for the study. Four drugs were docked on the X-ray crystallographic EGFR structure (1XKK). GOLD and AutoDock Vina produced results in terms of fitness score and binding affinity, respectively. GOLD prioritized varlitinib and AutoDock Vina preferred imatinib over other drugs. To reach the consensus from both software, all four drugs coupled with EGFR were studied rigorously. GOLD demonstrated varlitinib to be the best inhibitor with highest fitness score of 109, whereas AutoDock Vina revealed imatinib as the potent ligand with least binding energy of -10.9 kcal/mol. Most stable hydrogen bonds observed by GOLD and maximum number of hydrophobic contacts along with strong ionic interaction exhibited by varlitinib through both software have led us to conclude varlitinib as the most potent EGFR inhibitor in the studied group.
引用
收藏
页码:1226 / 1237
页数:12
相关论文
共 50 条
[41]   Synthesis and evaluation of 177Lu-labeled anti-EGFR Fab antibody for lung cancer [J].
Li, Yuan-Yuan ;
Yu, Jia-Yan ;
Wang, Tao ;
Wang, Jing ;
Zhao, Peng ;
Yang, Xia ;
Wei, Hong-Yuan ;
Chen, Yue .
JOURNAL OF RADIOANALYTICAL AND NUCLEAR CHEMISTRY, 2025, 334 (03) :2139-2149
[42]   In vitro anti-Helicobacter pylori and anti-gastric cancer activities of Acacia nilotica aqueous leaf extract and its validation using in silico molecular docking approach [J].
Sampath, Gattu ;
Shyu, Douglas J. H. ;
Rameshkumar, Neelamegam ;
Krishnan, Muthukalingan ;
Kayalvizhi, Nagarajan .
MATERIALS TODAY-PROCEEDINGS, 2022, 51 :1675-1684
[43]   Antitumor and antileishmanial evaluation of novel heterocycles derived from quinazoline scaffold: a molecular modeling approach [J].
Fleita, Daisy H. ;
Mohareb, Rafat M. ;
Sakka, Ola K. .
MEDICINAL CHEMISTRY RESEARCH, 2013, 22 (05) :2207-2221
[44]   Synthesis and evaluation of novel non-covalent binding quinazoline glycoside derivatives targeting the L858R and T790M variants of EGFR [J].
Zhang, Renshuai ;
Chen, Shaopeng ;
Zhang, Xiaowei ;
Yu, Rilei ;
Wan, Shengbiao ;
Geng, Meiyu ;
Jiang, Tao .
RSC ADVANCES, 2016, 6 (43) :36857-36862
[45]   Potential Anti-Cancer Flavonoids Isolated From Caesalpinia bonduc Young Twigs and Leaves: Molecular Docking and In Silico Studies [J].
Iheagwam, Franklyn Nonso ;
Ogunlana, Olubanke Olujoke ;
Ogunlana, Oluseyi Ebenezer ;
Isewon, Itunuoluwa ;
Oyelade, Jelili .
BIOINFORMATICS AND BIOLOGY INSIGHTS, 2019, 13
[46]   In silico docking analysis to explore the proapoptotic and anti cell proliferative potential of ferulic acid [J].
Prabhakar, M. Manoj ;
Manoharan, S. ;
Ignacimuthu, S. ;
Stalin, A. .
INDIAN JOURNAL OF BIOCHEMISTRY & BIOPHYSICS, 2016, 53 (1-2) :17-23
[47]   Design, synthesis, biological evaluation, and molecular docking study on triazine based derivatives as anti-inflammatory agents [J].
Asadi, Parvin ;
Alvani, Mohsen ;
Hajhashemi, Valiollah ;
Rostami, Mahboubeh ;
Khodarahmi, Ghadamali .
JOURNAL OF MOLECULAR STRUCTURE, 2021, 1243
[48]   In Ovo and In Silico Evaluation of the Anti-Angiogenic Potential of Syringin [J].
Aventurado, Charlaine A. ;
Billones, Junie B. ;
Vasquez, Ross D. ;
Castillo, Agnes L. .
DRUG DESIGN DEVELOPMENT AND THERAPY, 2020, 14 :5189-5204
[49]   In silico Identification of Potential Small Molecules Targeting Six Proteins in Nipah Virus using Molecular Docking, Pharmacophore and Molecular Dynamics Simulation [J].
John, Arun ;
Joy, Amitha ;
Padman, Midhila ;
Praveena, P. .
LETTERS IN DRUG DESIGN & DISCOVERY, 2023, 20 (05) :604-618
[50]   Exploring Quinazoline Nitro-Derivatives as Potential Antichagasic Agents: Synthesis and In Vitro Evaluation [J].
Vazquez, Citlali ;
Matus-Meza, Audifas-Salvador ;
Nunez-Moreno, Oswaldo ;
Barbosa-Sanchez, Brenda Michelle ;
Farias-Gutierrez, Victor Manuel ;
Mendoza-Conde, Mariana ;
Hernandez-Luis, Francisco ;
Saavedra, Emma .
MOLECULES, 2024, 29 (18)