A Novel Ferroptosis Related Gene Signature for Prognosis Prediction in Patients With Colon Cancer

被引:45
作者
Nie, Jianhua [1 ]
Shan, Dan [1 ]
Li, Shun [1 ]
Zhang, Shuyuan [1 ]
Zi, Xiaolin [1 ]
Xing, Fan [2 ]
Shi, Jiaqi [1 ]
Liu, Caiqi [1 ]
Wang, Tianjiao [3 ]
Sun, Xiaoyuan [1 ]
Zhang, Qian [1 ]
Zhou, Meng [1 ]
Luo, Shengnan [1 ]
Meng, Hongxue [4 ]
Zhang, Yanqiao [1 ]
Zheng, Tongsen [1 ,5 ,6 ]
机构
[1] Harbin Med Univ, Canc Hosp, Dept Gastrointestinal Med Oncol, Harbin, Peoples R China
[2] Harbin Med Univ, Affiliated Hosp 2, Dept Radiat Oncol, Harbin, Peoples R China
[3] Harbin Med Univ, Canc Hosp, Dept Internal Med 7, Harbin, Peoples R China
[4] Harbin Med Univ, Canc Hosp, Dept Pathol, Harbin, Peoples R China
[5] Harbin Med Univ, Canc Hosp, Dept Phase Trials Ctr 1, Harbin, Peoples R China
[6] Heilongjiang Canc Inst, Key Lab Mol Oncol, Harbin, Peoples R China
基金
中国国家自然科学基金;
关键词
ferroptosis; prognosis; colon cancer; STING; immune status; CELL-DEATH;
D O I
10.3389/fonc.2021.654076
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Purpose Colon cancer (CC) is a serious disease burden. The prognosis of patients with CC is different, so looking for effective biomarkers to predict prognosis is vitally important. Ferroptosis is a promising therapeutic and diagnosis strategy in CC. However, the role of ferroptosis in prognosis of CC has not been studied. The aim of the study is to build a prognosis model related ferroptosis, and provide clues for further therapy of CC. Methods The RNA-seq data were from TCGA (training group) and GEO (testing group). The R language and Perl language were used to process and analyze data. LASSO regression analysis was used to build the prognosis model. ssGSEA was used to compare the immune status between two groups. Immunohistochemistry was used to detect expression of AKR1C1 and CARS1 in colon cancer tissues and adjacent tissues. Results The prognosis model consisted of five ferroptosis related genes (AKR1C1, ALOX12, FDFT1, ATP5MC3, and CARS1). The area under curve (AUC) at 1-, 2-, and 3-year were 0.668, 0.678, and 0.686, respectively. The high- and low-risk patients had significant survival probability and could be clearly distinguished by the PCA and t-SNE analysis. The multivariate cox regression analysis also showed the riskscore is an independent prognosis factor. Importantly, we found that the immune status between high- and low-risk patients were different obviously, such as CD8(+)T cells. And STING, a new promising immune target, was also correlated to our signature genes statistically significantly. Conclusion Our ferroptosis prognosis signature could predict survival of CC patients to a certain degree. And the crosstalk between ferroptosis and immune, especially STING need further studies.
引用
收藏
页数:12
相关论文
共 50 条
[41]   A Novel Ferroptosis-Related Gene Prognosis Signature and Identifying Atorvastatin as a Potential Therapeutic Agent for Hepatocellular Carcinoma [J].
Wang, Ling ;
He, Xiaoqin ;
Shen, Yang ;
Chen, Jiayu ;
Chen, Yukai ;
Zhou, Zhuolin ;
Xu, Ximing .
CURRENT ISSUES IN MOLECULAR BIOLOGY, 2025, 47 (03)
[42]   Construction and analysis of a novel ferroptosis-related gene signature predicting prognosis in lung adenocarcinoma [J].
Zhou, Jing ;
Wang, Xinyue ;
Li, Zhaona ;
Jiang, Richeng .
FEBS OPEN BIO, 2021, :3005-3018
[43]   A Novel Ferroptosis-Related lncRNA Signature for Prognosis Prediction in Patients with Papillary Renal Cell Carcinoma [J].
Dang, Ruijie ;
Jin, Meiling ;
Nan, Jingzhu ;
Jiang, Xuege ;
He, Zheng ;
Su, Fang ;
Li, Diangeng .
INTERNATIONAL JOURNAL OF GENERAL MEDICINE, 2022, 15 :207-222
[44]   A Novel Ferroptosis-Related Gene Signature Predicts Recurrence in Patients With Pancreatic Ductal Adenocarcinoma [J].
Feng, Zengyu ;
Chen, Peng ;
Li, Kexian ;
Lou, Jianyao ;
Wu, Yulian ;
Li, Tao ;
Peng, Chenghong .
FRONTIERS IN MOLECULAR BIOSCIENCES, 2021, 8
[45]   Construction of a Novel Ferroptosis-Related Gene Signature for Predicting Survival of Patients With Lung Adenocarcinoma [J].
Song, Xiaojie ;
Wu, Liqun ;
Wang, Guangqiang ;
Liu, Baoyi ;
Zhu, Wenyong .
FRONTIERS IN ONCOLOGY, 2022, 12
[46]   A novel liquid-liquid phase separation-related gene signature for predicting prognosis in colon cancer [J].
Wang, Shuo ;
Hou, Sen ;
Jiang, Shan ;
Wang, Chao ;
Zhang, Peipei ;
Ye, Yingjiang ;
Gao, Zhidong .
FRONTIERS IN IMMUNOLOGY, 2024, 15
[47]   Identification of a ferroptosis-related gene signature predictive model in colon cancer [J].
Ye Wang ;
Heng-bo Xia ;
Zhang-ming Chen ;
Lei Meng ;
A-man Xu .
World Journal of Surgical Oncology, 19
[48]   A 15-gene signature for prediction of colon cancer recurrence and prognosis based on SVM [J].
Xu, Guangru ;
Zhang, Minghui ;
Zhu, Hongxing ;
Xu, Jinhua .
GENE, 2017, 604 :33-40
[49]   A Novel m7G-Related Gene Signature Predicts the Prognosis of Colon Cancer [J].
Chen, Jing ;
Song, Yi-Wen ;
Liang, Guan-Zhan ;
Zhang, Zong-Jin ;
Wen, Xiao-Feng ;
Li, Rui-Bing ;
Chen, Yong-Le ;
Pan, Wei-Dong ;
He, Xiao-Wen ;
Hu, Tuo ;
Xian, Zhen-Yu .
CANCERS, 2022, 14 (22)
[50]   Construction and Validation of a 6-Ferroptosis Related Gene Signature for Prognosis and Immune Landscape Prediction in Melanoma [J].
Yue, Zhanghui ;
Sun, Jianfang ;
Shi, Liqing .
FRONTIERS IN GENETICS, 2022, 13